Evidence map›Paper›PMID 29339425›Full record

ArticlemBio2018

Secondary Metabolism and Interspecific Competition Affect Accumulation of Spontaneous Mutants in the GacS-GacA Regulatory System in

Qing Yan, Lucas D Lopes, Brenda T Shaffer, Teresa A Kidarsa, Oliver Vining, Benjamin Philmus, Chunxu Song, Virginia O Stockwell, Jos M Raaijmakers, Kerry L McPhail and 3 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 60 citations in OpenAlex.

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  14. Energy Metabolism Enhance Perylenequinone Biosynthesis inInternational journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Qing YanDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA.
Lucas D LopesDepartment of Soil Science, "Luiz de Queiroz" College of Agriculture, University of São Paulo, Piracicaba, São Paulo, Brazil.
Brenda T ShafferHorticultural Crops Research Laboratory, Agricultural Research Service, U.S. Department of Agriculture, Corvallis, Oregon, USA.
Teresa A KidarsaHorticultural Crops Research Laboratory, Agricultural Research Service, U.S. Department of Agriculture, Corvallis, Oregon, USA.
Oliver ViningDepartment of Pharmaceutical Science, Oregon State University, Corvallis, Oregon, USA.
Benjamin PhilmusDepartment of Pharmaceutical Science, Oregon State University, Corvallis, Oregon, USA.
Chunxu SongDepartment of Microbial Ecology, Netherlands Institute of Ecology, Wageningen, Netherlands.
Virginia O StockwellHorticultural Crops Research Laboratory, Agricultural Research Service, U.S. Department of Agriculture, Corvallis, Oregon, USA.
Jos M RaaijmakersDepartment of Microbial Ecology, Netherlands Institute of Ecology, Wageningen, Netherlands.
Kerry L McPhailDepartment of Pharmaceutical Science, Oregon State University, Corvallis, Oregon, USA.
Fernando D AndreoteDepartment of Soil Science, "Luiz de Queiroz" College of Agriculture, University of São Paulo, Piracicaba, São Paulo, Brazil.
Jeff H ChangDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA.
Joyce E LoperDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA loperj@science.oregonstate.edu.ORCID 0000-0003-3501-5969
Oregon State University · USAgricultural Research Service · USNetherlands Institute of Ecology · NLUniversidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Secondary metabolites are synthesized by many microorganisms and provide a fitness benefit in the presence of competitors and predators. Secondary metabolism also can be costly, as it shunts energy and intermediates from primary metabolism. In

Indexed as

MutationSecondary MetabolismBacillus subtilisBacterial ProteinsEnergy MetabolismMicrobial InteractionsPhenolsPseudomonasPyrrolesTranscription FactorsBacterial ProteinsGacA protein, BacteriaPhenolspyoluteorinPyrrolesTranscription FactorsGacS-GacAinterspecific competitionPseudomonassecondary metabolismspontaneous mutations

Identifiers

PMID29339425
PMCPMC5770548
OpenAlexW2768763979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.