Evidence map›Paper›PMID 29339059›Full record

ArticleAnalytical biochemistry2018

Moving toward rapid and low-cost point-of-care molecular diagnostics with a repurposed 3D printer and RPA.

Kamfai Chan, Pui-Yan Wong, Chaitanya Parikh, Season Wong

Abstract read
In one paragraph

Article in Analytical biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. A need to raise the bar - A systematic review of temporal trends in diagnostics for Japanese encephalitis virus infection, and perspectives for future research.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2020
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  17. Diagnostics in space: will zero gravity add weight to new advances?Expert review of molecular diagnostics · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kamfai ChanAI Biosciences, Inc., College Station, TX 77845, USA.
Pui-Yan WongAI Biosciences, Inc., College Station, TX 77845, USA.
Chaitanya ParikhAI Biosciences, Inc., College Station, TX 77845, USA.
Season WongAI Biosciences, Inc., College Station, TX 77845, USA. Electronic address: season.wong@aibiosciences.com.

Funding

A rapid, accurate, and easy-to-use diagnostic assay for STIsR44AI106239 · NIAID · AI BIOSCIENCES, INC. · PI WONG, SEASON S-S · 2017 to 2018
$1.4M
Rapid and Low- cost POC Assay for Zika Virus DiagnosisR43AI129061 · NIAID · AI BIOSCIENCES, INC. · PI WONG, SEASON S-S · 2017 to 2017
$225k
NIAID NIH HHS R43 AI129061NIAID NIH HHS R44 AI106239
6 · The paper itself

Abstract

Traditionally, the majority of nucleic acid amplification-based molecular diagnostic tests are done in centralized settings. In recent years, point-of-care tests have been developed for use in low-resource settings away from central laboratories. While most experts agree that point-of-care molecular tests are greatly needed, their availability as cost-effective and easy-to-operate tests remains an unmet goal. In this article, we discuss our efforts to develop a recombinase polymerase amplification reaction-based test that will meet these criteria. First, we describe our efforts in repurposing a low-cost 3D printer as a platform that can carry out medium-throughput, rapid, and high-performing nucleic acid extraction. Next, we address how these purified templates can be rapidly amplified and analyzed using the 3D printer's heated bed or the deconstructed, low-cost thermal cycler we have developed. In both approaches, real-time isothermal amplification and detection of template DNA or RNA can be accomplished using a low-cost portable detector or smartphone camera. Last, we demonstrate the capability of our technologies using foodborne pathogens and the Zika virus. Our low-cost approach does not employ complicated and high-cost components, making it suitable for resource-limited settings. When integrated and commercialized, it will offer simple sample-to-answer molecular diagnostics.

Indexed as

Nucleic Acid Amplification TechniquesPolymerase Chain ReactionPrinting, Three-DimensionalDNAFoodborne DiseasesHumansPoint-of-Care SystemsRecombinasesRNAZika VirusDNARecombinasesRNA3D printersFoodborne pathogensLow-resource settingsNucleic acid extractionRecombinase polymerase amplificationZika virus

Identifiers

PMID29339059
PMCPMC5849525

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.