Evidence map›Paper›PMID 29337983›Full record

ArticlePLoS genetics2018

Wor1 establishes opaque cell fate through inhibition of the general co-repressor Tup1 in Candida albicans.

Selma S Alkafeef, Clinton Yu, Lan Huang, Haoping Liu

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  3. Article
  4. Genetic and environmental control of parasexual reproduction in the pathogenicMicrobiology and molecular biology reviews : MMBR · 2025
    Review
  5. Article
  6. Article
  7. White-opaque switching inMicrobiology and molecular biology reviews : MMBR · 2024
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. The Roles of Chromatin Accessibility in Regulating theJournal of fungi (Basel, Switzerland) · 2021
    Review
  13. Parasexuality ofFrontiers in cellular and infection microbiology · 2021
    Review
  14. Mechanism of Candida pathogenesis: revisiting the vital drivers.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2020
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Selma S AlkafeefDepartment of Biological Chemistry, University of California, Irvine, California, United States of America.
Clinton YuDepartment of Physiology and Biophysics, University of California, Irvine, California, United States of America.
Lan HuangDepartment of Physiology and Biophysics, University of California, Irvine, California, United States of America.
Haoping LiuDepartment of Biological Chemistry, University of California, Irvine, California, United States of America.
University of California, Irvine · US

Funding

Proteomics of the Proteasome Interacting NetworksR01GM074830 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI HUANG, LAN · 2005 to 2022
$6.1M
Signal sensing, hyphal development and pathognesis of Candida albicansR01GM117111 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI LIU, HAOPING · 2017 to 2024
$3.8M
Dissecting triazole resistance and transcriptional regulation of ergosterol homeoR01AI099190 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI LIU, HAOPING · 2012 to 2016
$3.1M
In Vivo Interactome and Dynamics of Cullin-Ring LigasesR01GM106003 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI HUANG, LAN, RYCHNOVSKY, SCOTT D. · 2013 to 2016
$772k
NIAID NIH HHS R01 AI099190NIGMS NIH HHS R01 GM074830NIGMS NIH HHS R01 GM106003NIGMS NIH HHS R01 GM117111NIH HHS R01AI099190NIH HHS R01GM074830NIH HHS R01GM106003NIH HHS R01GM117111
6 · The paper itself

Abstract

The pathogenic fungus Candida albicans can undergo phenotypic switching between two heritable states: white and opaque. This phenotypic plasticity facilitates its colonization in distinct host niches. The master regulator WOR1 is exclusively expressed in opaque phase cells. Positive feedback regulation by Wor1 on the WOR1 promoter is essential for opaque formation, however the underlying mechanism of how Wor1 functions is not clear. Here, we use tandem affinity purification coupled with mass spectrometry to identify Wor1-interacting proteins. Tup1 and its associated complex proteins are found as the major factors associated with Wor1. Tup1 occupies the same regions of the WOR1 promoter as Wor1 preferentially in opaque cells. Loss of Tup1 is sufficient to induce the opaque phase, even in the absence of Wor1. This is the first such report of a bypass of Wor1 in opaque formation. These genetic analyses suggest that Tup1 is a key repressor of the opaque state, and Wor1 functions via alleviating Tup1 repression at the WOR1 promoter. Opaque cells convert to white en masse at 37°C. We show that this conversion occurs only in the presence of glycolytic carbon sources. The opaque state is stabilized when cells are cultured on non-glycolytic carbon sources, even in a MTLa/α background. We further show that temperature and carbon source affect opaque stability by altering the levels of Wor1 and Tup1 at the WOR1 promoter. We propose that Wor1 and Tup1 form the core regulatory circuit controlling the opaque transcriptional program. This model provides molecular insights on how C. albicans adapts to different host signals to undergo phenotypic switching for colonization in distinct host niches.

Indexed as

Candida albicansCell DifferentiationCo-Repressor ProteinsDown-RegulationFungal ProteinsGene Expression Regulation, FungalGenes, Mating Type, FungalGenes, SwitchPhenotypePromoter Regions, GeneticTranscription FactorsCo-Repressor ProteinsFungal ProteinsTranscription Factors

Identifiers

PMID29337983
PMCPMC5786334
OpenAlexW2783200144

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.