Evidence map›Paper›PMID 29335553›Full record

ArticleNature microbiology2018

Mutations in ppe38 block PE_PGRS secretion and increase virulence of Mycobacterium tuberculosis.

Louis S Ates, Anzaan Dippenaar, Roy Ummels, Sander R Piersma, Aniek D van der Woude, Kim van der Kuij, Fabien Le Chevalier, Dulce Mata-Espinosa, Jorge Barrios-Payán, Brenda Marquina-Castillo and 8 more

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Nature microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
11.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 137 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Gene conversion is a key driver of diversity hotspots inbioRxiv : the preprint server for biology · 2026
    Article
  6. ESX-5 Deletions inbioRxiv : the preprint server for biology · 2025
    Article
  7. Loss of the ESX-5 secretion locus inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. UShER-TB: Scalable, Comprehensive, Accessible Phylogenomic Analysis ofmedRxiv : the preprint server for health sciences · 2025
    Article
  9. Article
  10. Article
  11. Loss of theScience advances · 2025
    Article
  12. Article
  13. Review
  14. Protease shaving ofMicrobiology spectrum · 2025
    Article
  15. The PE/PPE family proteins ofFrontiers in immunology · 2025
    Review
  16. Frontiers in microbiology · 2025
    Article
  17. Article
  18. Article
  19. PE/PPE Proteome and ESX-5 Substrate Spectrum inInternational journal of molecular sciences · 2024
    Article
  20. Article

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 5 countries.

Louis S AtesDepartment of Medical Microbiology and Infection Prevention, VU University Medical Center, Amsterdam, The Netherlands. Louis.Ates@gmail.com.ORCID http://orcid.org/0000-0002-2953-8010
Anzaan DippenaarDST/NRF Centre of Excellence for Biomedical Tuberculosis Research, SAMRC Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, South Africa.
Roy UmmelsDepartment of Medical Microbiology and Infection Prevention, VU University Medical Center, Amsterdam, The Netherlands.
Sander R PiersmaDepartment of Medical Oncology, OncoProteomics Laboratory, VU University Medical Center, Amsterdam, Netherlands.
Aniek D van der WoudeDepartment of Medical Microbiology and Infection Prevention, VU University Medical Center, Amsterdam, The Netherlands.
Kim van der KuijDepartment of Medical Microbiology and Infection Prevention, VU University Medical Center, Amsterdam, The Netherlands.
Fabien Le ChevalierUnit for Integrated Mycobacterial Pathogenomics, Institut Pasteur, Paris, France.
Dulce Mata-EspinosaExperimental Pathology Section, Department of Pathology, National Institute of Medical Sciences and Nutrition "Salvador Zubirán", México City, Mexico.
Jorge Barrios-PayánExperimental Pathology Section, Department of Pathology, National Institute of Medical Sciences and Nutrition "Salvador Zubirán", México City, Mexico.
Brenda Marquina-CastilloExperimental Pathology Section, Department of Pathology, National Institute of Medical Sciences and Nutrition "Salvador Zubirán", México City, Mexico.
Carolina GuapilloExperimental Pathology Section, Department of Pathology, National Institute of Medical Sciences and Nutrition "Salvador Zubirán", México City, Mexico.
Connie R JiménezDepartment of Medical Oncology, OncoProteomics Laboratory, VU University Medical Center, Amsterdam, Netherlands.
Arnab PainPathogen Genomics Laboratory, BESE Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID http://orcid.org/0000-0002-1755-2819
Edith N G HoubenSection Molecular Microbiology, Amsterdam Institute of Molecules, Medicine & Systems, Vrije Universiteit, Amsterdam, The Netherlands.
Robin M WarrenDST/NRF Centre of Excellence for Biomedical Tuberculosis Research, SAMRC Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, South Africa.
Roland BroschUnit for Integrated Mycobacterial Pathogenomics, Institut Pasteur, Paris, France.ORCID http://orcid.org/0000-0003-2587-3863
Rogelio Hernández-PandoExperimental Pathology Section, Department of Pathology, National Institute of Medical Sciences and Nutrition "Salvador Zubirán", México City, Mexico.
Wilbert BitterDepartment of Medical Microbiology and Infection Prevention, VU University Medical Center, Amsterdam, The Netherlands. W.Bitter@vumc.nl.ORCID http://orcid.org/0000-0001-8347-6511
Amsterdam UMC Location Vrije Universiteit Amsterdam · NLInstituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXInstitut Pasteur · FRSouth African Medical Research Council · ZAVrije Universiteit Amsterdam · NLKing Abdullah University of Science and Technology · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycobacterium tuberculosis requires a large number of secreted and exported proteins for its virulence, immune modulation and nutrient uptake. Most of these proteins are transported by the different type VII secretion systems

Indexed as

AnimalsAntigens, BacterialBacterial ProteinsBeijingDisease Models, AnimalDNA, BacterialGene DeletionHumansMembrane ProteinsMice, Inbred BALB CMutationMycobacterium tuberculosisPhenotypePhylogenyTuberculosis, PulmonaryType VII Secretion SystemsAntigens, BacterialBacterial ProteinsDNA, BacterialESX-5 protein, Mycobacterium tuberculosisMembrane ProteinsPE-PGRS protein, MycobacteriumType VII Secretion SystemsVirulence Factors

Identifiers

PMID29335553
OpenAlexW2784014905

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.