Evidence map›Paper›PMID 29335539›Full record

ArticleNature communications2018

Brain activity patterns in high-throughput electrophysiology screen predict both drug efficacies and side effects.

Peter M Eimon, Mostafa Ghannad-Rezaie, Gianluca De Rienzo, Amin Allalou, Yuelong Wu, Mu Gao, Ambrish Roy, Jeffrey Skolnick, Mehmet Fatih Yanik

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 69 citations in OpenAlex.

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  20. Fish Capsules: A System for High-Throughput Screening of Combinatorial Drugs.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Peter M EimonMassachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA. peter.eimon@gmail.com.
Mostafa Ghannad-RezaieMassachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA.
Gianluca De RienzoMassachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA.
Amin AllalouMassachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA.ORCID http://orcid.org/0000-0003-4028-8443
Yuelong WuMassachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA.
Mu GaoGeorgia Institute of Technology, 950 Atlantic Drive, Room 2151, Atlanta, GA, 30332, USA.
Ambrish RoyGeorgia Institute of Technology, 950 Atlantic Drive, Room 2151, Atlanta, GA, 30332, USA.
Jeffrey SkolnickGeorgia Institute of Technology, 950 Atlantic Drive, Room 2151, Atlanta, GA, 30332, USA.
Mehmet Fatih YanikMassachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA. yanik@ethz.ch.
Massachusetts Institute of Technology · USGeorgia Institute of Technology · USEpix Pharmaceuticals (United States) · USETH Zurich · CH

Funding

Purchase of a GPU cluster for deep learning applications in protein-protein interaction and supercomplex prediction and biochemical literature annotation.R35GM118039 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI JEFFREY SKOLNICK · 2016 to 2026
$5.8M
Generating transplantable neurons by in vivo combinatorial screening of transcripDP1NS082101 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YANIK, MEHMET FATIH · 2012 to 2015
$3.2M
HIGH-THROUGHPUT IN VIVO SUBCELLULAR-RESOLUTION VERTEBRATE SCREENING PLATFORMR01NS073127 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YANIK, MEHMET FATIH · 2010 to 2014
$2.0M
NIGMS NIH HHS R35 GM118039NINDS NIH HHS DP1 NS082101NINDS NIH HHS R01 NS073127
6 · The paper itself

Abstract

Neurological drugs are often associated with serious side effects, yet drug screens typically focus only on efficacy. We demonstrate a novel paradigm utilizing high-throughput in vivo electrophysiology and brain activity patterns (BAPs). A platform with high sensitivity records local field potentials (LFPs) simultaneously from many zebrafish larvae over extended periods. We show that BAPs from larvae experiencing epileptic seizures or drug-induced side effects have substantially reduced complexity (entropy), similar to reduced LFP complexity observed in Parkinson's disease. To determine whether drugs that enhance BAP complexity produces positive outcomes, we used light pulses to trigger seizures in a model of Dravet syndrome, an intractable genetic epilepsy. The highest-ranked compounds identified by BAP analysis exhibit far greater anti-seizure efficacy and fewer side effects during subsequent in-depth behavioral assessment. This high correlation with behavioral outcomes illustrates the power of brain activity pattern-based screens and identifies novel therapeutic candidates with minimal side effects.

Indexed as

Electrophysiological PhenomenaAnimalsBrainDisease Models, AnimalElectrophysiologyEpilepsies, MyoclonicHumansLarvaPsychotropic DrugsZebrafishPsychotropic Drugs

Identifiers

PMID29335539
PMCPMC5768723
OpenAlexW2784251784

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.