Evidence map›Paper›PMID 29335507›Full record

ArticleScientific reports2018

Highly conserved molecular pathways, including Wnt signaling, promote functional recovery from spinal cord injury in lampreys.

Paige E Herman, Angelos Papatheodorou, Stephanie A Bryant, Courtney K M Waterbury, Joseph R Herdy, Anthony A Arcese, Joseph D Buxbaum, Jeramiah J Smith, Jennifer R Morgan, Ona Bloom

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 1 pooled it
5.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 1 synthesis or guideline pooled it, 73 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. The role of Wnt/mTOR signaling in spinal cord injury.Journal of clinical orthopaedics and trauma · 2022
    Review
  16. Article
  17. Review
  18. Article
  19. CDK14 Promotes Axon Regeneration by Regulating the Noncanonical Wnt Signaling Pathway in a Kinase-Independent Manner.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Paige E HermanThe Feinstein Institute for Medical Research, Center for Autoimmune and Musculoskeletal Disease, Manhasset, NY, 11030, USA.
Angelos PapatheodorouThe Feinstein Institute for Medical Research, Center for Autoimmune and Musculoskeletal Disease, Manhasset, NY, 11030, USA.
Stephanie A BryantUniversity of Kentucky, Department of Biology, Lexington, KY, 40506, USA.
Courtney K M WaterburyUniversity of Kentucky, Department of Biology, Lexington, KY, 40506, USA.
Joseph R HerdyUniversity of Kentucky, Department of Biology, Lexington, KY, 40506, USA.
Anthony A ArceseThe Feinstein Institute for Medical Research, Center for Autoimmune and Musculoskeletal Disease, Manhasset, NY, 11030, USA.
Joseph D BuxbaumIcahn School of Medicine at Mount Sinai, Department of Psychiatry, New York, NY, 10029, USA.
Jeramiah J SmithUniversity of Kentucky, Department of Biology, Lexington, KY, 40506, USA.
Jennifer R MorganMarine Biological Laboratory, The Eugene Bell Center for Regenerative Biology and Tissue Engineering, Woods Hole, MA, 02543, USA. jmorgan@mbl.edu.
Ona BloomThe Feinstein Institute for Medical Research, Center for Autoimmune and Musculoskeletal Disease, Manhasset, NY, 11030, USA. obloom@northwell.edu.
Feinstein Institute for Medical Research · USUniversity of Kentucky · USIcahn School of Medicine at Mount Sinai · USMarine Biological Laboratory · US

Funding

Mechanisms of Synaptic Dysfunction in Parkinson s and Other Synuclein-Linked DiseasesR01NS078165 · NINDS · UNIVERSITY OF TEXAS AT AUSTIN · PI Jennifer Rebecca Morgan · 2012 to 2026
$5.5M
Functional analysis of programmed genome rearrangementR01GM104123 · NIGMS · UNIVERSITY OF KENTUCKY · PI SMITH, JERAMIAH JAMES · 2013 to 2017
$1.4M
Transcriptome analysis of a regenerating vertebrate spinal cord after injuryR03NS078519 · NINDS · FEINSTEIN INSTITUTE FOR MEDICAL RESEARCH · PI BLOOM, ONA · 2012 to 2013
$165k
NIGMS NIH HHS R01 GM104123NINDS NIH HHS R01 NS078165NINDS NIH HHS R03 NS078519
6 · The paper itself

Abstract

In mammals, spinal cord injury (SCI) leads to dramatic losses in neurons and synaptic connections, and consequently function. Unlike mammals, lampreys are vertebrates that undergo spontaneous regeneration and achieve functional recovery after SCI. Therefore our goal was to determine the complete transcriptional responses that occur after SCI in lampreys and to identify deeply conserved pathways that promote regeneration. We performed RNA-Seq on lamprey spinal cord and brain throughout the course of functional recovery. We describe complex transcriptional responses in the injured spinal cord, and somewhat surprisingly, also in the brain. Transcriptional responses to SCI in lampreys included transcription factor networks that promote peripheral nerve regeneration in mammals such as Atf3 and Jun. Furthermore, a number of highly conserved axon guidance, extracellular matrix, and proliferation genes were also differentially expressed after SCI in lampreys. Strikingly, ~3% of differentially expressed transcripts belonged to the Wnt pathways. These included members of the Wnt and Frizzled gene families, and genes involved in downstream signaling. Pharmacological inhibition of Wnt signaling inhibited functional recovery, confirming a critical role for this pathway. These data indicate that molecular signals present in mammals are also involved in regeneration in lampreys, supporting translational relevance of the model.

Indexed as

Gene Regulatory NetworksLampreysSignal TransductionSpinal Cord RegenerationAnimalsBrainGene Expression ProfilingSequence Analysis, RNASpinal CordSpinal Cord Injuries

Identifiers

PMID29335507
PMCPMC5768751
OpenAlexW2783757578

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.