ArticleBMC genetics2018
Association between sequence variants in panicle development genes and the number of spikelets per panicle in rice.
Article in BMC genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
8 citing papers in PubMed, 18 citations in OpenAlex.
- A High-Throughput Method for Accurate Extraction of Intact Rice Panicle Traits.Plant phenomics (Washington, D.C.) · 2024Article
- Genome-wide association analysis identifies natural allelic variants associated with panicle architecture variation in African rice, Oryza glaberrima Steud.G3 (Bethesda, Md.) · 2023Article
- Article
- Pyramiding of multiple strong-culm genes originating from indica and tropical japonica to the temperate japonica rice.Scientific reports · 2022Article
- Development and characterization of chromosome segment substitution lines derived from backcross betweenBreeding science · 2021Article
- Designing a Mini-Core Collection Effectively Representing 3004 Diverse Rice Accessions.Plant communications · 2020Article
- Automated Counting of Rice Panicle by Applying Deep Learning Model to Images from Unmanned Aerial Vehicle Platform.Sensors (Basel, Switzerland) · 2019Article
- A genome-wide association study using a Vietnamese landrace panel of rice (Oryza sativa) reveals new QTLs controlling panicle morphological traits.BMC plant biology · 2018Article
Corrections and comments
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Authors and funding
8 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundBalancing panicle-related traits such as panicle length and the numbers of primary and secondary branches per panicle, is key to improving the number of spikelets per panicle in rice. Identifying genetic information contributes to a broader understanding of the roles of gene and provides candidate alleles for use as DNA markers. Discovering relations between panicle-related traits and sequence variants allows opportunity for molecular application in rice breeding to improve the number of spikelets per panicle.
resultsIn total, 142 polymorphic sites, which constructed 58 haplotypes, were detected in coding regions of ten panicle development gene and 35 sequence variants in six genes were significantly associated with panicle-related traits. Rice cultivars were clustered according to their sequence variant profiles. One of the four resultant clusters, which contained only indica and tong-il varieties, exhibited the largest average number of favorable alleles and highest average number of spikelets per panicle, suggesting that the favorable allele combination found in this cluster was beneficial in increasing the number of spikelets per panicle.
conclusionsFavorable alleles identified in this study can be used to develop functional markers for rice breeding programs. Furthermore, stacking several favorable alleles has the potential to substantially improve the number of spikelets per panicle in rice.
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