ArticleFunctional & integrative genomics2018
Genome-wide characterization of differentially expressed genes provides insights into regulatory network of heat stress response in radish (Raphanus sativus L.).
Article in Functional & integrative genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- Insights into physiological, biochemical and molecular mechanisms of abiotic stress tolerance in Persian walnut (Juglans regia L.).Protoplasma · 2026Review
- In the thick of it: radish thermotolerance and root development under heat shock.Plant physiology · 2026Article
- Morphological, Physiological, and Molecular Responses to Heat Stress in Brassicaceae.Plants (Basel, Switzerland) · 2025Review
- Article
- Systematic analysis of Heat Shock Protein 70 (HSP70) gene family in radish and potential roles in stress tolerance.BMC plant biology · 2024Article
- Modulation in the enzymatic antioxidants, MDA level and elicitation in conessine biomolecule in3 Biotech · 2023Article
- Characterization ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- Genome-Wide Identification and Functional Characterization of the Cation Proton Antiporter (CPA) Family Related to Salt Stress Response in Radish (International journal of molecular sciences · 2020Article
- Genome-wide sRNA and mRNA transcriptomic profiling insights into dynamic regulation of taproot thickening in radish (Raphanus sativus L.).BMC plant biology · 2020Article
- Genome-wide identification and transcript profiles of walnut heat stress transcription factor involved in abiotic stress.BMC genomics · 2020Article
- Comparative transcriptomics of an arctic foundation species, tussock cottongrass (Eriophorum vaginatum), during an extreme heat event.Scientific reports · 2020Article
- Characterization of the DREBA4-Type Transcription Factor (SlDREBA4), Which Contributes to Heat Tolerance in Tomatoes.Frontiers in plant science · 2020Article
- Root Growth Adaptation to Climate Change in Crops.Frontiers in plant science · 2020Review
- Genome- and Transcriptome-Wide Characterization ofInternational journal of molecular sciences · 2019Article
- Article
- Early Response of Radish to Heat Stress by Strand-Specific Transcriptome and miRNA Analysis.International journal of molecular sciences · 2019Article
- Identification, Expression Analysis of the Hsf Family, and Characterization of Class A4 inInternational journal of molecular sciences · 2018Article
- Article
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7 authors.
Funding
Abstract
Heat stress (HS) causes detrimental effects on plant morphology, physiology, and biochemistry that lead to drastic reduction in plant biomass production and economic yield worldwide. To date, little is known about HS-responsive genes involved in thermotolerance mechanism in radish. In this study, a total of 6600 differentially expressed genes (DEGs) from the control and Heat24 cDNA libraries of radish were isolated by high-throughput sequencing. With Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, some genes including MAPK, DREB, ERF, AP2, GST, Hsf, and Hsp were predominantly assigned in signal transductions, metabolic pathways, and biosynthesis and abiotic stress-responsive pathways. These pathways played significant roles in reducing stress-induced damages and enhancing heat tolerance in radish. Expression patterns of 24 candidate genes were validated by reverse-transcription quantitative PCR (RT-qPCR). Based mainly on the analysis of DEGs combining with the previous miRNAs analysis, the schematic model of HS-responsive regulatory network was proposed. To counter the effects of HS, a rapid response of the plasma membrane leads to the opening of specific calcium channels and cytoskeletal reorganization, after which HS-responsive genes are activated to repair damaged proteins and ultimately facilitate further enhancement of thermotolerance in radish. These results could provide fundamental insight into the regulatory network underlying heat tolerance in radish and facilitate further genetic manipulation of thermotolerance in root vegetable crops.
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