Evidence map›Paper›PMID 29330943›Full record

ArticleThe Prostate2018

Epigenetic markers in circulating cell-free DNA as prognostic markers for survival of castration-resistant prostate cancer patients.

Rianne J Hendriks, Siebren Dijkstra, Frank P Smit, Johan Vandersmissen, Hendrik Van de Voorde, Peter F A Mulders, Inge M van Oort, Wim Van Criekinge, Jack A Schalken

Open access · hybridAbstract read
In one paragraph

Article in The Prostate, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 50 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Liquid biopsy to personalize treatment for metastatic prostate cancer.American journal of translational research · 2024
    Review
  5. Review
  6. Review
  7. Glutathione-S-TransferaseInternational journal of endocrinology · 2023
    Review
  8. Review
  9. Complexities of Prostate Cancer.International journal of molecular sciences · 2022
    Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Epigenetics in prostate cancer: clinical implications.Translational andrology and urology · 2021
    Review
  18. Review
  19. Cell-Free DNA: Hope and Potential Application in Cancer.Frontiers in cell and developmental biology · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Rianne J HendriksDepartment of Urology, Radboud University Medical Center, Nijmegen, The Netherlands.
Siebren DijkstraDepartment of Urology, Radboud University Medical Center, Nijmegen, The Netherlands.
Frank P SmitMDxHealth, Inc., Irvine, California.
Johan VandersmissenMDxHealth, Inc., Irvine, California.
Hendrik Van de VoordeMDxHealth, Inc., Irvine, California.
Peter F A MuldersDepartment of Urology, Radboud University Medical Center, Nijmegen, The Netherlands.
Inge M van OortDepartment of Urology, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID 0000-0002-8002-1869
Wim Van CriekingeDepartment of Mathematical Modeling, Statistics and Bio-Informatics, Ghent University, Ghent, Belgium.
Jack A SchalkenDepartment of Urology, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID 0000-0001-8274-7797
Radboud University Nijmegen · NLCoxHealth · USGhent University · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNoninvasive biomarkers to guide personalized treatment for castration-resistant prostate cancer (CRPC) are needed. In this study, we analyzed hypermethylation patterns of two genes (GSTP1 and APC) in plasma cell-free DNA (cfDNA) of CRPC patients. The aim of this study was to analyze the cfDNA concentrations and levels of the epigenetic markers and to assess the value of these biomarkers for prognosis.

methodsIn this prospective study, patients were included before starting new treatment after developing CRPC. The blood samples were collected prior to start of the treatment and at three time points thereafter. cfDNA was extracted from 1.5 mL of plasma and before performing a methylation-specific PCR, bisulfate modification was carried out.

resultsThe median levels of cfDNA, GSTP1, and APC copies in the baseline samples of CRPC patients (n = 47) were higher than in controls (n = 30). In the survival analysis, the group with baseline marker levels below median had significant less PCa-related deaths (P-values <0.02) and did not reach the median survival point. The survival distributions for the groups were statistically significant for the cfDNA concentration, GSTP1 and APC copies, as well as PSA combined with GSTP1 + APC (P-values <0.03). Furthermore, there were strong positive correlations between PSA and marker response after starting treatment (P-values <0.04).

conclusionsIn conclusion, this study showed the kinetics of methylated cfDNA (GSTP1 and APC) in plasma of CRPC patients after starting treatment. Furthermore, the value of the markers before treatment is prognostic for overall survival. These results are promising for developing a test to guide treatment-decision-making for CRPC patients.

Indexed as

Adenomatous Polyposis Coli ProteinAdultAgedCell-Free Nucleic AcidsCirculating Tumor DNADNA MethylationEpigenesis, GeneticGlutathione S-Transferase piHumansMaleMiddle AgedPrognosisProspective StudiesProstatic Neoplasms, Castration-ResistantAdenomatous Polyposis Coli ProteinAPC protein, humanCell-Free Nucleic AcidsCirculating Tumor DNAGlutathione S-Transferase piGSTP1 protein, humanAPCcell-free DNAepigeneticsGSTP1hypermethylationprostate cancer

Identifiers

PMID29330943
PMCPMC5838798
OpenAlexW2789398681

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.