Evidence map›Paper›PMID 29330918›Full record

ArticleMolecular plant pathology2018

Leptosphaeria maculans AvrLm9: a new player in the game of hide and seek with AvrLm4-7.

Kaveh Ghanbarnia, Lisong Ma, Nicholas J Larkan, Parham Haddadi, Wannakuwattewaduge Gerard Dilantha Fernando, Mohammad Hossein Borhan

Abstract read
In one paragraph

Article in Molecular plant pathology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Breeding and management of major resistance genes to stem canker/blackleg in Brassica crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Review
  5. Article
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  8. Article
  9. Review
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  14. Article
  15. Article
  16. Efficacy of Blackleg Major Resistance Genes inPathogens (Basel, Switzerland) · 2022
    Article
  17. International journal of molecular sciences · 2022
    Article
  18. Review
  19. Article
  20. Genome-wide mapping of histone modifications during axenic growth in two species of Leptosphaeria maculans showing contrasting genomic organization.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kaveh GhanbarniaSaskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, SK, Canada S7N 0X2.
Lisong MaSaskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, SK, Canada S7N 0X2.
Nicholas J LarkanSaskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, SK, Canada S7N 0X2.
Parham HaddadiSaskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, SK, Canada S7N 0X2.
Wannakuwattewaduge Gerard Dilantha FernandoDepartment of Plant Science, University of Manitoba, Winnipeg, MB, Canada R3T 2N2.
Mohammad Hossein BorhanSaskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, SK, Canada S7N 0X2.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Blackleg disease of Brassica napus caused by Leptosphaeria maculans (Lm) is largely controlled by the deployment of race-specific resistance (R) genes. However, selection pressure exerted by R genes causes Lm to adapt and give rise to new virulent strains through mutation and deletion of effector genes. Therefore, a knowledge of effector gene function is necessary for the effective management of the disease. Here, we report the cloning of Lm effector AvrLm9 which is recognized by the resistance gene Rlm9 in B. napus cultivar Goéland. AvrLm9 was mapped to scaffold 7 of the Lm genome, co-segregating with the previously reported AvrLm5 (previously known as AvrLmJ1). Comparison of AvrLm5 alleles amongst the 37 re-sequenced Lm isolates and transgenic complementation identified a single point mutation correlating with the AvrLm9 phenotype. Therefore, we renamed this gene as AvrLm5-9 to reflect the dual specificity of this locus. Avrlm5-9 transgenic isolates were avirulent when inoculated on the B. napus cultivar Goéland. The expression of AvrLm5-9 during infection was monitored by RNA sequencing. The recognition of AvrLm5-9 by Rlm9 is masked in the presence of AvrLm4-7, another Lm effector. AvrLm5-9 and AvrLm4-7 do not interact, and AvrLm5-9 is expressed in the presence of AvrLm4-7. AvrLm5-9 is the second Lm effector for which host recognition is masked by AvrLm4-7. An understanding of this complex interaction will provide new opportunities for the engineering of broad-spectrum recognition.

Indexed as

AscomycotaBrassica napusDisease ResistanceFungal ProteinsPlant DiseasesFungal ProteinsAvrLm4-7AvrLm9blacklegBrassica napuseffectorsLeptosphaeria maculansphoma stem cankerRlm9

Identifiers

PMID29330918
PMCPMC6638032

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.