Evidence map›Paper›PMID 29329300›Full record

ArticlePloS one2018

Symmetric dimeric bisbenzimidazoles DBP(n) reduce methylation of RARB and PTEN while significantly increase methylation of rRNA genes in MCF-7 cancer cells.

Svetlana V Kostyuk, Margarita A Kvasha, Daria A Khrabrova, Olga V Kirsanova, Elizaveta S Ershova, Elena M Malinovskaya, Natalia N Veiko, Alexander A Ivanov, Vasiliy S Koval, Alexei L Zhuze and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 10 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Svetlana V KostyukResearch Centre for Medical Genetics, Moscow, Russia.
Margarita A KvashaChemistry Department, Moscow State University, Moscow, Russia.
Daria A KhrabrovaChemistry Department, Moscow State University, Moscow, Russia.
Olga V KirsanovaChemistry Department, Moscow State University, Moscow, Russia.
Elizaveta S ErshovaResearch Centre for Medical Genetics, Moscow, Russia.
Elena M MalinovskayaResearch Centre for Medical Genetics, Moscow, Russia.
Natalia N VeikoResearch Centre for Medical Genetics, Moscow, Russia.
Alexander A IvanovN.N. Blokhin Russian Cancer Research Center, Moscow, Russia.
Vasiliy S KovalEngelhardt Institute of Molecular Biology, Moscow, Russia.
Alexei L ZhuzeEngelhardt Institute of Molecular Biology, Moscow, Russia.
Vadim H TashlitskyChemistry Department, Moscow State University, Moscow, Russia.
Pavel E UmriukhinI.M. Sechenov First Moscow State Medical University (Sechenov University), Moscow, Russia.ORCID 0000-0001-8628-7353
Sergey I KutsevChemistry Department, Moscow State University, Moscow, Russia.
Elizaveta S GromovaChemistry Department, Moscow State University, Moscow, Russia.
Lomonosov Moscow State University · RUResearch Centre for Medical Genetics · RUEngelhardt Institute of Molecular Biology · RURussian Cancer Research Center NN Blokhin · RUSechenov University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHypermethylation is observed in the promoter regions of suppressor genes in the tumor cancer cells. Reactivation of these genes by demethylation of their promoters is a prospective strategy of the anticancer therapy. Previous experiments have shown that symmetric dimeric bisbenzimidazoles DBP(n) are able to block DNA methyltransferase activities. It was also found that DBP(n) produces a moderate effect on the activation of total gene expression in HeLa-TI population containing epigenetically repressed avian sarcoma genome. PRINCIPAL

findingsIt is shown that DBP(n) are able to penetrate the cellular membranes and accumulate in breast carcinoma cell MCF-7, mainly in the mitochondria and in the nucleus, excluding the nucleolus. The DBP(n) are non-toxic to the cells and have a weak overall demethylation effect on genomic DNA. DBP(n) demethylate the promoter regions of the tumor suppressor genes PTEN and RARB. DBP(n) promotes expression of the genes RARB, PTEN, CDKN2A, RUNX3, Apaf-1 and APC "silent" in the MCF-7 because of the hypermethylation of their promoter regions. Simultaneously with the demethylation of the DNA in the nucleus a significant increase in the methylation level of rRNA genes in the nucleolus was detected. Increased rDNA methylation correlated with a reduction of the rRNA amount in the cells by 20-30%. It is assumed that during DNA methyltransferase activity inhibition by the DBP(n) in the nucleus, the enzyme is sequestered in the nucleolus and provides additional methylation of the rDNA that are not shielded by DBP(n). CONCLUSIONS/SIGNIFICANCE: It is concluded that DBP (n) are able to accumulate in the nucleus (excluding the nucleolus area) and in the mitochondria of cancer cells, reducing mitochondrial potential. The DBP (n) induce the demethylation of a cancer cell's genome, including the demethylation of the promoters of tumor suppressor genes. DBP (n) significantly increase the methylation of ribosomal RNA genes in the nucleoli. Therefore the further study of these compounds is needed; it could lead to the creation of new anticancer agents.

Indexed as

BenzimidazolesDimerizationDNA MethylationHeLa CellsHumansMCF-7 CellsPTEN PhosphohydrolaseReactive Oxygen SpeciesReceptors, Retinoic AcidRNA, RibosomalBenzimidazolesPTEN PhosphohydrolasePTEN protein, humanReactive Oxygen SpeciesReceptors, Retinoic Acidretinoic acid receptor betaRNA, Ribosomal

Identifiers

PMID29329300
PMCPMC5766121
OpenAlexW2782660769

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.