Evidence map›Paper›PMID 29328472›Full record

ArticleMolecular medicine reports2018

Combined analysis of gene expression and genome binding profiles identified potential therapeutic targets of ciclopirox in Ewing sarcoma.

Baisheng Yuan, Wei Ji, Haipeng Xia, Jianmin Li

Open access · hybridAbstract read
In one paragraph

Article in Molecular medicine reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Reposition of the Fungicide Ciclopirox for Cancer Treatment.Recent patents on anti-cancer drug discovery · 2021
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Baisheng YuanDepartment of Orthopaedics, Qilu Hospital of Shandong University (Qingdao), Qingdao, Shandong 266035, P.R. China.
Wei JiDepartment of Orthopaedics, Qilu Hospital of Shandong University (Qingdao), Qingdao, Shandong 266035, P.R. China.
Haipeng XiaDepartment of Orthopaedics, Qilu Hospital of Shandong University (Qingdao), Qingdao, Shandong 266035, P.R. China.
Jianmin LiDepartment of Orthopaedics, Qilu Hospital of Shandong University (Qingdao), Qingdao, Shandong 266035, P.R. China.
Qilu Hospital of Shandong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ciclopirox (CPX) is a synthetic antifungal drug that is mainly used to treat dermatomycoses. The aim of the present study was to determine whether CPX could influence Ewing sarcoma progression. The present study suggested that CPX treatment may inhibit Ewing sarcoma (ES) progression through Ewing sarcoma breakpoint region 1‑Friend leukemia integration 1 (EWS‑FLI1), a common fusion transcript structure in patients with ES. To determine the underlying mechanisms of ES progression, cross analysis was conducted on three high‑throughput genome or transcript me datasets from the Gene Expression Omnibus. The results indicated that CPX may inhibit ES growth by affecting vasculature development and DNA replication. A combination of genome‑wide expression and binding profiles revealed several potential targets for CPX in ES, including collagen type I α2 chain, N‑myc proto‑oncogene and transforming growth factor β1, which contained significantly enriched binding peaks of FLI1. In addition, network analysis, including a protein‑protein interaction network and a transcription regulatory network, provided further detailed information about the roles of CPX in ES. This study may provide a novel solution for ES treatment and may also aid in improving its prognosis.

Indexed as

Gene Expression Regulation, NeoplasticGenome, HumanAntifungal AgentsAntineoplastic AgentsBone NeoplasmsCell Line, TumorCiclopiroxCollagen Type ICollagen Type I, alpha 1 ChainDatabases, GeneticDrug RepositioningGene Expression ProfilingGene OntologyGene Regulatory NetworksHumansMolecular Sequence AnnotationAntifungal AgentsAntineoplastic AgentsCiclopiroxCollagen Type ICollagen Type I, alpha 1 ChainEWS-FLI fusion proteinMYCN protein, humanN-Myc Proto-Oncogene ProteinOncogene Proteins, FusionProto-Oncogene Protein c-fli-1PyridonesRNA-Binding Protein EWSTGFB1 protein, humanTransforming Growth Factor beta1chromatin immune precipitation followed by high-throughput sequencingciclopiroxEwing sarcomaEwing sarcoma breakpoint region 1-Friend leukemia integration 1 fusion transcriptGene Expression Omnibus

Identifiers

PMID29328472
PMCPMC5802202
OpenAlexW2784148082

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.