Evidence map›Paper›PMID 29323790›Full record

ArticleChembiochem : a European journal of chemical biology2018

RNA-Templated Concatenation of Triplet Nucleic-Acid Probe.

Raman Bahal, Arunava Manna, Wei-Che Hsieh, Shivaji A Thadke, Gopalsamy Sureshkumar, Danith H Ly

Open access · greenAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Next generation miRNA inhibition using short anti-seed PNAs encapsulated in PLGA nanoparticles.Journal of controlled release : official journal of the Controlled Release Society · 2020
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Raman BahalSchool of Pharmacy, University of Connecticut, 69 N. Eagleville Road, Storrs, CT, 06269, USA.
Arunava MannaDepartment of Chemistry, Institute for Biomolecular Design and Discovery (IBD), and CNAST, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA.
Wei-Che HsiehDepartment of Chemistry, Institute for Biomolecular Design and Discovery (IBD), and CNAST, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA.
Shivaji A ThadkeDepartment of Chemistry, Institute for Biomolecular Design and Discovery (IBD), and CNAST, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA.
Gopalsamy SureshkumarDepartment of Chemistry, Institute for Biomolecular Design and Discovery (IBD), and CNAST, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA.
Danith H LyDepartment of Chemistry, Institute for Biomolecular Design and Discovery (IBD), and CNAST, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA.ORCID 0000-0002-8760-0070
Carnegie Mellon University · USUniversity of Connecticut · US

Funding

A Rational Approach to Targeting Unstable RNA RepeatsR21NS098102 · NINDS · CARNEGIE-MELLON UNIVERSITY · PI LY, DANITH H · 2017 to 2018
$425k
NINDS NIH HHS R21 NS098102
6 · The paper itself

Abstract

Template-directed synthesis offers several distinct benefits over conventional laboratory creation, including unsurpassed reaction rate and selectivity. Although it is central to many biological processes, such an approach has rarely been applied to the in situ synthesis and recognition of biomedically relevant target. Towards this goal, we report the development of a three-codon nucleic-acid probe containing a C-terminal thioester group and an N-terminal cysteine that is capable of undergoing template-directed oligomerization in the presence of an RNA target and self-deactivation in its absence. The work has implications for the development of millamolecular nucleic-acid probes for targeting RNA-repeated expansions associated with myotonic dystrophy type 1 and other related neuromuscular and neurodegenerative disorders.

Indexed as

CodonCysteineNucleic Acid HybridizationPeptide Nucleic AcidsPolymerizationRNARNA ProbesTransition TemperatureCodonCysteinePeptide Nucleic AcidsRNARNA Probesconcatenationnative chemical ligationpeptide nucleic acidsRNAtemplate synthesis

Identifiers

PMID29323790
PMCPMC9703916
OpenAlexW2783837114

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.