Evidence map›Paper›PMID 29323348›Full record

ArticleScientific reports2018

Mouse Antibody of IgM Class is Prone to Non-Enzymatic Cleavage between CH1 and CH2 Domains.

Tomasz Klaus, Krystyna Stalińska, Dominik Czaplicki, Paweł Mak, Bozena Skupien-Rabian, Sylwia Kedracka-Krok, Karolina Wiatrowska, Monika Bzowska, Monika Machula, Joanna Bereta

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Tomasz KlausMalopolska Centre of Biotechnology, Jagiellonian University in Kraków, Gronostajowa 7A, 30-387, Kraków, Poland.
Krystyna StalińskaDepartment of Cell Biochemistry, Jagiellonian University in Kraków, Gronostajowa 7, 30-387, Kraków, Poland.
Dominik CzaplickiDepartment of Cell Biochemistry, Jagiellonian University in Kraków, Gronostajowa 7, 30-387, Kraków, Poland.ORCID http://orcid.org/0000-0003-2583-0775
Paweł MakDepartment of Analytical Biochemistry, Jagiellonian University in Kraków, Gronostajowa 7, 30-387, Kraków, Poland.
Bozena Skupien-RabianMalopolska Centre of Biotechnology, Jagiellonian University in Kraków, Gronostajowa 7A, 30-387, Kraków, Poland.
Sylwia Kedracka-KrokDepartment of Physical Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University in Kraków, Gronostajowa 7, 30-387, Kraków, Poland.
Karolina WiatrowskaDepartment of Cell Biochemistry, Jagiellonian University in Kraków, Gronostajowa 7, 30-387, Kraków, Poland.
Monika BzowskaDepartment of Cell Biochemistry, Jagiellonian University in Kraków, Gronostajowa 7, 30-387, Kraków, Poland.
Monika MachulaDepartment of Cell Biochemistry, Jagiellonian University in Kraków, Gronostajowa 7, 30-387, Kraków, Poland.
Joanna BeretaDepartment of Cell Biochemistry, Jagiellonian University in Kraków, Gronostajowa 7, 30-387, Kraków, Poland. joanna.bereta@uj.edu.pl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

IgM is a multivalent antibody which evolved as a first line defense of adaptive immunity. It consists of heavy and light chains assembled into a complex oligomer. In mouse serum there are two forms of IgM, a full-length and a truncated one. The latter contains μ' chain, which lacks a variable region. Although μ' chain was discovered many years ago, its origin has not yet been elucidated. Our results indicate that μ' chain is generated from a full-length heavy chain by non-enzymatic cleavage of the protein backbone. The cleavage occurred specifically after Asn209 and is prevented by mutating this residue into any other amino acid. The process requires the presence of other proteins, preferentially with an acidic isoelectric point, and is facilitated by neutral or alkaline pH. This unique characteristic of the investigated phenomenon distinguishes it from other, already described, Asn-dependent protein reactions. A single IgM molecule is able to bind up to 12 epitopes via its antigen binding fragments (Fabs). The cleavage at Asn209 generates truncated IgM molecules and free Fabs, resulting in a reduced IgM valence and probably affecting IgM functionality in vivo.

Indexed as

Amino Acid SequenceAnimalsHEK293 CellsHep G2 CellsHumansHydrogen-Ion ConcentrationImmunoglobulin Heavy ChainsImmunoglobulin MMiceMutagenesis, Site-DirectedProtein DomainsImmunoglobulin Heavy ChainsImmunoglobulin M

Identifiers

PMID29323348
PMCPMC5764968

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.