Evidence map›Paper›PMID 29321624›Full record

ArticleHeredity2018

Strong trans-Pacific break and local conservation units in the Galapagos shark (Carcharhinus galapagensis) revealed by genome-wide cytonuclear markers.

Diana A Pazmiño, Gregory E Maes, Madeline E Green, Colin A Simpfendorfer, E Mauricio Hoyos-Padilla, Clinton J A Duffy, Carl G Meyer, Sven E Kerwath, Pelayo Salinas-de-León, Lynne van Herwerden

Abstract read
In one paragraph

Article in Heredity, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Diana A PazmiñoCentre for Sustainable Tropical Fisheries and Aquaculture, College of Science and Engineering, James Cook University, Townsville, QLD, Australia. diana.pazminojaramillo@my.jcu.edu.au.ORCID http://orcid.org/0000-0001-7082-3254
Gregory E MaesCentre for Sustainable Tropical Fisheries and Aquaculture, College of Science and Engineering, James Cook University, Townsville, QLD, Australia.
Madeline E GreenInstitute for Marine and Antarctic Studies, University of Tasmania, Private Bag 49, Hobart, TAS, Australia.
Colin A SimpfendorferCentre for Sustainable Tropical Fisheries and Aquaculture, College of Science and Engineering, James Cook University, Townsville, QLD, Australia.
E Mauricio Hoyos-PadillaPelagios-Kakunjá A.C. Sinaloa 1540, La Paz, Baja California Sur, Mexico.
Clinton J A DuffyAuckland War Memorial Museum, The Domain, Auckland, New Zealand.
Carl G MeyerHawaii Institute of Marine Biology, University of Hawaii at Manoa, Coconut Island, Kaneohe, HI, USA.
Sven E KerwathDepartment of Biological Sciences, University of Cape Town, Private Bag × 3, Rondebosch, South Africa.
Pelayo Salinas-de-LeónDepartment of Marine Sciences, Charles Darwin Research Station. Av Charles Darwin s/n, Puerto Ayora, Galapagos Islands, Santa Cruz, Ecuador.
Lynne van HerwerdenCentre for Sustainable Tropical Fisheries and Aquaculture, College of Science and Engineering, James Cook University, Townsville, QLD, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The application of genome-wide cytonuclear molecular data to identify management and adaptive units at various spatio-temporal levels is particularly important for overharvested large predatory organisms, often characterized by smaller, localized populations. Despite being "near threatened", current understanding of habitat use and population structure of Carcharhinus galapagensis is limited to specific areas within its distribution. We evaluated population structure and connectivity across the Pacific Ocean using genome-wide single-nucleotide polymorphisms (~7200 SNPs) and mitochondrial control region sequences (945 bp) for 229 individuals. Neutral SNPs defined at least two genetically discrete geographic groups: an East Tropical Pacific (Mexico, east and west Galapagos Islands), and another central-west Pacific (Lord Howe Island, Middleton Reef, Norfolk Island, Elizabeth Reef, Kermadec, Hawaii and Southern Africa). More fine-grade population structure was suggested using outlier SNPs: west Pacific, Hawaii, Mexico, and Galapagos. Consistently, mtDNA pairwise Φ

Indexed as

Genetics, PopulationGenetic VariationAnimalsConservation of Natural ResourcesDNA, MitochondrialEcuadorFemaleGenotypeMalePacific OceanPhylogenyPolymorphism, Single NucleotideSharksDNA, Mitochondrial

Identifiers

PMID29321624
PMCPMC5889387

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.