Evidence map›Paper›PMID 29321601›Full record

ArticleScientific reports2018

CRISPR/Cas9-mediated gene modification and gene knock out in the human-infective parasite Trichomonas vaginalis.

Brian D Janssen, Yi-Pei Chen, Brenda M Molgora, Shuqi E Wang, Augusto Simoes-Barbosa, Patricia J Johnson

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 53 citations in OpenAlex.

  1. Impact of pH andProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  3. The CRISPR-Cas9 System inMicroorganisms · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Using graph-based model to identify cell specific synthetic lethal effects.Computational and structural biotechnology journal · 2023
    Article
  8. CRISPR-Cas9: Taming protozoan parasites with bacterial scissor.Journal of parasitic diseases : official organ of the Indian Society for Parasitology · 2022
    Review
  9. The L-Rhamnose Biosynthetic Pathway inInternational journal of molecular sciences · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Effects of Dense Granular Protein 6 (GRA6) Disruption onFrontiers in veterinary science · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Brian D JanssenDepartment of Microbiology, Immunology & Molecular Genetics, University of California, Los Angeles, California, USA.
Yi-Pei ChenDepartment of Microbiology, Immunology & Molecular Genetics, University of California, Los Angeles, California, USA.
Brenda M MolgoraDepartment of Microbiology, Immunology & Molecular Genetics, University of California, Los Angeles, California, USA.
Shuqi E WangSchool of Biological Sciences, University of Auckland, Auckland, New Zealand.ORCID http://orcid.org/0000-0002-4460-7221
Augusto Simoes-BarbosaSchool of Biological Sciences, University of Auckland, Auckland, New Zealand.
Patricia J JohnsonDepartment of Microbiology, Immunology & Molecular Genetics, University of California, Los Angeles, California, USA. johnsonp@ucla.edu.
University of California, Los Angeles · USUniversity of Auckland · NZ

Funding

MULTIDISCIPLINARY TRAINING IN MICROBIAL PATHOGENESIST32AI007323 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Peter John Bradley · 1988 to 2026
$8.6M
Trichomonas vaginalis exosomes: Mediators of host:pathogen interactionsR01AI103182 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, PATRICIA JEAN · 2013 to 2017
$2.9M
Inhibitors of Nitro Drug Targets as Antimicrobials against Trichomonas VaginalisR33AI119721 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, PATRICIA JEAN · 2017 to 2019
$1.4M
Inhibitors of Nitro Drug Targets as Antimicrobials against Trichomonas VaginalisR21AI119721 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, PATRICIA JEAN · 2015 to 2016
$424k
NIAID NIH HHS R01 AI103182NIAID NIH HHS R21 AI119721NIAID NIH HHS R33 AI119721NIAID NIH HHS T32 AI007323
6 · The paper itself

Abstract

The sexually-transmitted parasite Trichomonas vaginalis infects ~1/4 billion people worldwide. Despite its prevalence and myriad adverse outcomes of infection, the mechanisms underlying T. vaginalis pathogenesis are poorly understood. Genetic manipulation of this single-celled eukaryote has been hindered by challenges presented by its complex, repetitive genome and inefficient methods for introducing DNA (i.e. transfection) into the parasite. Here, we have developed methods to increase transfection efficiency using nucleofection, with the goal of efficiently introducing multiple DNA elements into a single T. vaginalis cell. We then created DNA constructs required to express several components essential to drive CRISPR/Cas9-mediated DNA modification: guide RNA (gRNA), the Cas9 endonuclease, short oligonucleotides and large, linearized DNA templates. Using these technical advances, we have established CRISPR/Cas9-mediated repair of mutations in genes contained on circular DNA plasmids harbored by the parasite. We also engineered CRISPR/Cas9 directed homologous recombination to delete (i.e. knock out) two non-essential genes within the T. vaginalis genome. This first report of the use of the CRISPR/Cas9 system in T. vaginalis greatly expands the ability to manipulate the genome of this pathogen and sets the stage for testing of the role of specific genes in many biological processes.

Indexed as

CRISPR-Cas SystemsGene EditingGene Knockout TechniquesFemaleGene ExpressionGenes, ProtozoanGenes, ReporterGene TargetingGenome, ProtozoanHumansTrichomonas vaginalisTrichomonas Vaginitis

Identifiers

PMID29321601
PMCPMC5762654
OpenAlexW2782164616

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.