Evidence map›Paper›PMID 29321504›Full record

ArticleScientific reports2018

Structural ensemble-based docking simulation and biophysical studies discovered new inhibitors of Hsp90 N-terminal domain.

Hyun-Hwi Kim, Ja-Shil Hyun, Joonhyeok Choi, Kwang-Eun Choi, Jun-Goo Jee, Sung Jean Park

Abstract read
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Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
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  5. A systematic approach to identify host targets and rapidly deliver broad-spectrum antivirals.Molecular therapy : the journal of the American Society of Gene Therapy · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hyun-Hwi KimCollege of Pharmacy and Gachon Institute of Pharmaceutical Sciences, Gachon University, Incheon, 21936, Republic of Korea.
Ja-Shil HyunCollege of Pharmacy and Gachon Institute of Pharmaceutical Sciences, Gachon University, Incheon, 21936, Republic of Korea.
Joonhyeok ChoiResearch Institute of Pharmaceutical Researches, College of Pharmacy, Kyungpook, National University, Daegu, 41566, Republic of Korea.
Kwang-Eun ChoiResearch Institute of Pharmaceutical Researches, College of Pharmacy, Kyungpook, National University, Daegu, 41566, Republic of Korea.
Jun-Goo JeeResearch Institute of Pharmaceutical Researches, College of Pharmacy, Kyungpook, National University, Daegu, 41566, Republic of Korea. jjee@knu.ac.kr.
Sung Jean ParkCollege of Pharmacy and Gachon Institute of Pharmaceutical Sciences, Gachon University, Incheon, 21936, Republic of Korea. psjnmr@gachon.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heat shock protein 90 (Hsp90) is one of the most abundant cellular proteins and plays a substantial role in the folding of client proteins. The inhibition of Hsp90 has been regarded as an attractive therapeutic strategy for treating cancer because many oncogenic kinases are Hsp90 client proteins. In this study, we report new inhibitors that directly bind to N-terminal ATP-binding pocket of Hsp90. Optimized structure-based virtual screening predicted candidate molecules, which was followed by confirmation using biophysical and cell-based assays. Among the reported crystal structures, we chose the two structures that show the most favourable early enrichments of true-positives in the receiver operating characteristic curve. Four molecules showed significant changes in the signals of 2D [

Indexed as

Molecular Docking SimulationMolecular Dynamics SimulationProtein Interaction Domains and MotifsAlgorithmsBinding SitesComputational BiologyDrug DesignHigh-Throughput Nucleotide SequencingHSP90 Heat-Shock ProteinsHumansMagnetic Resonance SpectroscopyProtein BindingStructure-Activity RelationshipHSP90 Heat-Shock Proteins

Identifiers

PMID29321504
PMCPMC5762686

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.