Evidence map›Paper›PMID 29321186›Full record

ArticleMolecular & cellular proteomics : MCP2018

Cross-species Comparison of Proteome Turnover Kinetics.

Kyle Swovick, Kevin A Welle, Jennifer R Hryhorenko, Andrei Seluanov, Vera Gorbunova, Sina Ghaemmaghami

Abstract readComparative Study
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Urinary metabolome dynamics inMetabolomics : Official journal of the Metabolomic Society · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Cross-species comparisons andInterface focus · 2021
    Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. The Dose-Dependent Pleiotropic Effects of the UBBFrontiers in molecular biosciences · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kyle SwovickFrom the ‡Department of Biology, University of Rochester, NY.
Kevin A Welle§University of Rochester Mass Spectrometry Resource Laboratory, NY.
Jennifer R Hryhorenko§University of Rochester Mass Spectrometry Resource Laboratory, NY.
Andrei SeluanovFrom the ‡Department of Biology, University of Rochester, NY.
Vera GorbunovaFrom the ‡Department of Biology, University of Rochester, NY.
Sina GhaemmaghamiFrom the ‡Department of Biology, University of Rochester, NY; sghaemma@bio.rochester.edu.

Funding

The role of hyaluronan in longevity and cancer resistance of longest-lived rodentP01AG047200 · NIA · UNIVERSITY OF ROCHESTER · PI JAN VIJG · 2014 to 2026
$36.9M
The role of SIRT6 posttranslational modifications in aging and genome stability. Supplement: Testing SIRT6 activators as potential Alzheimer's disease therapy.R01AG027237 · NIA · UNIVERSITY OF ROCHESTER · PI Vera Gorbunova · 2006 to 2026
$6.2M
The prevalence and mechanism of selectivity in basal autophagyR35GM119502 · NIGMS · UNIVERSITY OF ROCHESTER · PI SINA GHAEMMAGHAMI · 2016 to 2026
$5.9M
Regulation of genome stability by SITR6R01AG046320 · NIA · UNIVERSITY OF ROCHESTER · PI SELUANOV, ANDREI · 2014 to 2018
$1.9M
QExactive for UR Proteomics ResearchS10OD021486 · OD · UNIVERSITY OF ROCHESTER · PI GHAEMMAGHAMI, SINA · 2016 to 2016
$309k
Comparative analysis of IGF-1 and mTOR signaling in short- and long-lived rodentsR03AG052365 · NIA · UNIVERSITY OF ROCHESTER · PI GORBUNOVA, VERA · 2016 to 2017
$154k
NIA NIH HHS P01 AG047200NIA NIH HHS R01 AG027237NIA NIH HHS R01 AG046320NIA NIH HHS R03 AG052365NIGMS NIH HHS R35 GM119502NIH HHS S10 OD021486
6 · The paper itself

Abstract

The constitutive process of protein turnover plays a key role in maintaining cellular homeostasis. Recent technological advances in mass spectrometry have enabled the measurement of protein turnover kinetics across the proteome. However, it is not known if turnover kinetics of individual proteins are highly conserved or if they have evolved to meet the physiological demands of individual species. Here, we conducted systematic analyses of proteome turnover kinetics in primary dermal fibroblasts isolated from eight different rodent species. Our results highlighted two trends in the variability of proteome turnover kinetics across species. First, we observed a decrease in cross-species correlation of protein degradation rates as a function of evolutionary distance. Second, we observed a negative correlation between global protein turnover rates and maximum lifespan of the species. We propose that by reducing the energetic demands of continuous protein turnover, long-lived species may have evolved to lessen the generation of reactive oxygen species and the corresponding oxidative damage over their extended lifespans.

Indexed as

ProteolysisProteomeAnimalsCells, CulturedFibroblastsKineticsLongevityRodentiaSpecies SpecificityProteome

Identifiers

PMID29321186
PMCPMC5880112

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.