Evidence map›Paper›PMID 29318719›Full record

ArticleProtein science : a publication of the Protein Society2018

Crystal stuctures of MglB-2 (TP0684), a topologically variant d-glucose-binding protein from Treponema pallidum, reveal a ligand-induced conformational change.

Chad A Brautigam, Ranjit K Deka, Wei Z Liu, Michael V Norgard

Open access · greenAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chad A BrautigamDepartment of Biophysics, The University of Texas Southwestern Medical Center, Dallas, Texas, 75390.
Ranjit K DekaDepartment of Microbiology, The University of Texas Southwestern Medical Center, Dallas, Texas, 75390.
Wei Z LiuDepartment of Microbiology, The University of Texas Southwestern Medical Center, Dallas, Texas, 75390.
Michael V NorgardDepartment of Microbiology, The University of Texas Southwestern Medical Center, Dallas, Texas, 75390.
Southwestern Medical CenterThe University of Texas Southwestern Medical Center · US

Funding

The flavin-centric metabolic lifestyle of Treponema pallidumR01AI056305 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI HENDRIXSON, DAVID R · 2003 to 2024
$9.6M
NIAID NIH HHS R01 AI056305
6 · The paper itself

Abstract

Previously, we determined the crystal structure of apo-TpMglB-2, a d-glucose-binding component of a putative ABC transporter from the syphilis spirochete Treponema pallidum. The protein had an unusual topology for this class of proteins, raising the question of whether the d-glucose-binding mode would be different in TpMglB-2. Here, we present the crystal structures of a variant of TpMglB-2 with and without d-glucose bound. The structures demonstrate that, despite its aberrant topology, the protein undergoes conformational changes and binds d-glucose similarly to other Mgl-type proteins, likely facilitating d-glucose uptake in T. pallidum.

Indexed as

Bacterial ProteinsCrystallography, X-RayGlucoseModels, MolecularMonosaccharide Transport ProteinsProtein ConformationTreponema pallidumBacterial ProteinsGlucoseMonosaccharide Transport ProteinsABC transporterconformational changeglucose-binding proteinspirochetesyphilis

Identifiers

PMID29318719
PMCPMC5866939
OpenAlexW2782616654

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.