Evidence map›Paper›PMID 29317699›Full record

ArticleScientific reports2018

Inflammatory Proteomic Network Analysis of Statin-treated and Lipopolysaccharide-activated Macrophages.

Abu Hena M Kamal, Jayanta K Chakrabarty, S M Nashir Udden, Md Hasan Zaki, Saiful M Chowdhury

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Noncanonical functions of adhesion proteins in inflammation.American journal of physiology. Cell physiology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Abu Hena M KamalDepartment of Chemistry and Biochemistry, University of Texas at Arlington, TX, 76019, USA.
Jayanta K ChakrabartyDepartment of Chemistry and Biochemistry, University of Texas at Arlington, TX, 76019, USA.
S M Nashir UddenDepartment of Pathology, UT Southwestern Medical Center, Dallas, TX, 75390, USA.
Md Hasan ZakiDepartment of Pathology, UT Southwestern Medical Center, Dallas, TX, 75390, USA.
Saiful M ChowdhuryDepartment of Chemistry and Biochemistry, University of Texas at Arlington, TX, 76019, USA. schowd@uta.edu.
The University of Texas at Arlington · USSouthwestern Medical CenterSouthwestern Medical Center · US

Funding

Identifying host-defense interactome caused by environmental and external agentsUA5GM113216 · NIGMS · UNIVERSITY OF TEXAS ARLINGTON · PI CHOWDHURY, SAIFUL M · 2015 to 2015
$355k
NIGMS NIH HHS UA5 GM113216
6 · The paper itself

Abstract

A significant component of immune biology research is the investigation of protein encoding genes that play central roles in contributing inflammatory response. A gel-free quantitative bottom-up proteomics study was performed on immune cell macrophages after the combined treatment of lipopolysaccharide (LPS) and statin drugs using mass spectrometry and a detailed bioinformatics analyses were conducted. Systematic bioinformatics analysis was applied for discovering novel relationships among proteins and effects of statin and lipopolysaccharide in macrophage cells. Based on gene ontology, majority of protein encoding genes was involved in metabolic and cellular processes and are actively associated with binding, structural molecular, and catalytic activity. Notably, proteomic data analyzed by Ingenuity Pathway Analysis (IPA), discovered the plectin and prohibitin 2 protein interactions network and inflammatory-disease based protein networks. Two up-regulated proteins, plectin and prohibitin 2, were further validated by immunoblotting. Plectin was also cross-validated by immunocytochemistry, since its expression was highly modulated by statin but inhibited during LPS-stimulation. Collectively, the significant up-regulation of plectin due to the treatment of statin, suggests that statin has a significant impact on the cytoskeletal networks of cells. Plectin might have a significant role in the intermediate filament assembly and dynamics, and possibly stabilizing and crosslinking intermediate filament networks.

Indexed as

ProteomeProteomicsActinsAnimalsChromatography, LiquidCytoskeletonHumansHydroxymethylglutaryl-CoA Reductase InhibitorsImmunohistochemistryLipopolysaccharidesMacrophage ActivationMacrophagesMicePlectinProhibitinsProtein Interaction MappingActinsHydroxymethylglutaryl-CoA Reductase InhibitorsLipopolysaccharidesPlectinProhibitinsProteomeRepressor Proteins

Identifiers

PMID29317699
PMCPMC5760528
OpenAlexW2782445446

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.