Evidence map›Paper›PMID 29317594›Full record

ArticleTranslational psychiatry2018

Polymorphism in Tmem132d regulates expression and anxiety-related behavior through binding of RNA polymerase II complex.

Roshan R Naik, Sergey V Sotnikov, Rebekka P Diepold, Stella Iurato, Patrick O Markt, Andrea Bultmann, Nadine Brehm, Tobias Mattheus, Beat Lutz, Angelika Erhardt and 5 more

Open access · goldAbstract read
In one paragraph

Article in Translational psychiatry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 110 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Observational
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Epigenetic Mechanisms Within the Cingulate Cortex Regulate Innate Anxiety-Like Behavior.The international journal of neuropsychopharmacology · 2019
    Article
  14. A Latent Gaussian Copula Model for Mixed Data Analysis in Brain Imaging Genetics.IEEE/ACM transactions on computational biology and bioinformatics
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Roshan R NaikMax Planck Institute of Psychiatry, 80804, Munich, Germany. rosnaik@gmail.com.
Sergey V SotnikovMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Rebekka P DiepoldMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Stella IuratoMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Patrick O MarktMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Andrea BultmannMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Nadine BrehmMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Tobias MattheusInstitute of Physiological Chemistry, University Medical Center of the Johannes Gutenberg University, Mainz, Germany.
Beat LutzInstitute of Physiological Chemistry, University Medical Center of the Johannes Gutenberg University, Mainz, Germany.
Angelika ErhardtMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Elisabeth B BinderMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Ulrike SchmidtMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Florian HolsboerMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Rainer LandgrafMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Ludwig CzibereMax Planck Institute of Psychiatry, 80804, Munich, Germany.
Max Planck Institute of Psychiatry · DEJohannes Gutenberg University Mainz · DEBecker Technologies (Germany) · DENanyang Technological University · SGSechenov University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TMEM132D is a candidate gene, where risk genotypes have been associated with anxiety severity along with higher mRNA expression in the frontal cortex of panic disorder patients. Concurrently, in a high (HAB) and low (LAB) trait anxiety mouse model, Tmem132d was found to show increased expression in the anterior cingulate cortex (aCC) of HAB as compared to LAB mice. To understand the molecular underpinnings underlying the differential expression, we sequenced the gene and found two single-nucleotide polymorphisms (SNPs) in the promoter differing between both lines which could explain the observed mRNA expression profiles using gene reporter assays. In addition, there was no difference in basal DNA methylation in the CpG Island that encompasses the HAB vs. LAB Tmem132d promoter region. Furthermore, we found significantly higher binding of RNA polymerase II (POLR2A) to the proximal HAB-specific SNP (rs233264624) than the corresponding LAB locus in an oligonucleotide pull-down assay, suggesting increased transcription. Virus mediated overexpression of Tmem132d in the aCC of C57BL/6 J mice could confirm its role in mediating an anxiogenic phenotype. To model gene-environmental interactions, HAB mice exposed to enriched environment (HAB-EE) responded with decreased anxiety levels but, had enhanced Tmem132d mRNA expression as compared to standard-housed HAB (HAB-SH) mice. While LAB mice subjected to unpredictable chronic mild stress (LAB-UCMS) exhibited higher anxiety levels and had lower mRNA expression compared to standard-housed LAB (LAB-SH) mice. Chromatin immunoprecipitation revealed significantly higher binding of POLR2A to rs233264624 in HAB-EE, while LAB-UCMS had lower POLR2A binding at this locus, thus explaining the enhanced or attenuated expression of Tmem132d compared to their respective SH controls. To further investigate gene-environment interactions, DNA methylation was assessed using Illumina 450 K BeadChip in 74 panic disorder patients. Significant methylation differences were observed in two CpGs (cg26322591 and cg03283235) located in TMEM132D depending on the number of positive life events supporting the results of an influence of positive environmental cues on regulation of Tmem132d expression in mice.

Indexed as

Behavior, AnimalGene-Environment InteractionAnimalsAnxietyBrainDisease Models, AnimalFemaleMaleMembrane ProteinsMiceMice, Inbred C57BLPolymorphism, Single NucleotidePromoter Regions, GeneticRNA Polymerase IIMembrane ProteinsRNA Polymerase IITmem132d protein, mouse

Identifiers

PMID29317594
PMCPMC5802467
OpenAlexW2780556868

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.