Evidence map›Paper›PMID 29316088›Full record

ReviewAddiction biology2019

Beyond genome-wide significance: integrative approaches to the interpretation and extension of GWAS findings for alcohol use disorder.

Jessica E Salvatore, Shizhong Han, Sean P Farris, Kristin M Mignogna, Michael F Miles, Arpana Agrawal

Abstract readReview
In one paragraph

Review in Addiction biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. "General Addiction Liability" Revisited.Clinical psychological science : a journal of the Association for Psychological Science · 2025
    Article
  3. Article
  4. Article
  5. FACTORS CONTRIBUTING TO THE ESCALATION OF ALCOHOL CONSUMPTION.Neuroscience and biobehavioral reviews · 2022
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Flying Together:International journal of molecular sciences · 2020
    Review
  11. Article
  12. Article
  13. Genetics of alcohol use disorder: a review.Current opinion in psychology · 2019
    Review
  14. Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jessica E SalvatoreDepartment of Psychology, Virginia Commonwealth University, Richmond, VA, USA.ORCID 0000-0001-5504-5087
Shizhong HanDepartment of Psychiatry, University of Iowa, Iowa City, IA, USA.
Sean P FarrisWaggoner Center for Alcohol and Addiction Research, The University of Texas at Austin, Austin, TX, USA.ORCID 0000-0002-9158-1984
Kristin M MignognaVirginia Institute for Psychiatric and Behavioral Genetics, Virginia Commonwealth University, Richmond, VA, USA.
Michael F MilesDepartment of Pharmacology and Toxicology, Virginia Commonwealth University, Richmond, VA, USA.ORCID 0000-0002-1532-584X
Arpana AgrawalDepartment of Psychiatry, Washington University School of Medicine, Saint Louis, MO, USA.ORCID 0000-0002-0313-793X

Funding

Project 5 - Genetic architecture of alcohol use disorder using cross-trait genetic correlations and public next-generation sequencing studiesP50AA022537 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI JENNIFER T WOLSTENHOLME · 2014 to 2026
$19.6M
7/7 Psychiatric Genomics Consortium: Finding actionable variationU01MH109532 · NIMH · WASHINGTON UNIVERSITY · PI AGRAWAL, ARPANA, EDENBERG, HOWARD J · 2016 to 2020
$3.1M
5/7 Psychiatric Genomics Consortium: Finding actionable variationU01MH109514 · NIMH · CARDIFF UNIVERSITY · PI O'DONOVAN, MICHAEL · 2016 to 2020
$2.9M
3/7 Psychiatric Genomics Consortium: Finding actionable variationU01MH109536 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CHARNEY, ALEXANDER W, HUCKINS, LAURA MARIANNE · 2016 to 2020
$2.7M
1/7 Psychiatric Genomics Consortium: Finding actionable variationU01MH109528 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SULLIVAN, PATRICK F · 2016 to 2020
$2.5M
A SYSTEMS APPROACH TO THE GENETIC STUDY OF ALCOHOL DEPENDENCER01AA024486 · NIAAA · UNIVERSITY OF IOWA · PI HAN, SHIZHONG, TAN, KAI · 2017 to 2020
$1.6M
Cross-species genetic analysis of ethanol-related behaviorR01AA020634 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI GROTEWIEL, MICHAEL S., MILES, MICHAEL F · 2012 to 2016
$1.3M
Fine mapping a gene sub-network underlying alcohol dependenceR01AA022994 · NIAAA · UNIVERSITY OF IOWA · PI HAN, SHIZHONG · 2014 to 2017
$1.3M
DELINEATING THE ROLE OF GENETIC INFLUENCES ON CANNABIS INVOLVEMENTK02DA032573 · NIDA · WASHINGTON UNIVERSITY · PI AGRAWAL, ARPANA · 2012 to 2021
$1.1M
Genetics, Romantic Relationships, and Alcohol Misuse in Emerging AdulthoodK01AA024152 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI SALVATORE, JESSICA E · 2016 to 2020
$741k
NIAAA NIH HHS K01 AA024152NIAAA NIH HHS P50 AA022537NIAAA NIH HHS R01 AA020634NIAAA NIH HHS R01 AA022994NIAAA NIH HHS R01 AA024486NIDA NIH HHS K02 DA032573NIMH NIH HHS U01 MH109514NIMH NIH HHS U01 MH109528NIMH NIH HHS U01 MH109532NIMH NIH HHS U01 MH109536
6 · The paper itself

Abstract

Alcohol use disorder (AUD) is a heritable complex behavior. Due to the highly polygenic nature of AUD, identifying genetic variants that comprise this heritable variation has proved to be challenging. With the exception of functional variants in alcohol metabolizing genes (e.g. ADH1B and ALDH2), few other candidate loci have been confidently linked to AUD. Genome-wide association studies (GWAS) of AUD and other alcohol-related phenotypes have either produced few hits with genome-wide significance or have failed to replicate on further study. These issues reinforce the complex nature of the genetic underpinnings for AUD and suggest that both GWAS studies with larger samples and additional analysis approaches that better harness the nominally significant loci in existing GWAS are needed. Here, we review approaches of interest in the post-GWAS era, including in silico functional analyses; functional partitioning of single nucleotide polymorphism heritability; aggregation of signal into genes and gene networks; and validation of identified loci, genes and gene networks in postmortem brain tissue and across species. These integrative approaches hold promise to illuminate our understanding of the biological basis of AUD; however, we recognize that the main challenge continues to be the extremely polygenic nature of AUD, which necessitates large samples to identify multiple loci associated with AUD liability.

Indexed as

AlcoholismGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMultifactorial InheritanceNeuroimagingPolymorphism, Single Nucleotidealcohol use disordercross-species validationfunctional genomicstranslational genomics

Identifiers

PMID29316088
PMCPMC6037617

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.