Evidence map›Paper›PMID 29315614›Full record

ArticleEpilepsia2018

Defining the phenotypic spectrum of SLC6A1 mutations.

Katrine M Johannesen, Elena Gardella, Tarja Linnankivi, Carolina Courage, Anne de Saint Martin, Anna-Elina Lehesjoki, Cyril Mignot, Alexandra Afenjar, Gaetan Lesca, Marie-Thérèse Abi-Warde and 42 more

Open access · bronzeAbstract read
In one paragraph

Article in Epilepsia, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed, 1 pooled it
11.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 1 synthesis or guideline pooled it, 147 citations in OpenAlex.

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22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

52 authors at 20 institutions in 11 countries.

Katrine M JohannesenThe Danish Epilepsy Center Filadelfia, Dianalund, Denmark.
Elena GardellaThe Danish Epilepsy Center Filadelfia, Dianalund, Denmark.
Tarja LinnankiviDepartment of Child Neurology, Children's Hospital, Helsinki University Hospital Helsinki, University of Helsinki, Helsinki, Finland.
Carolina CourageThe Folkhälsan Institute of Genetics, University of Helsinki, Helsinki, Finland.
Anne de Saint MartinDepartment of Pediatrics, Pediatric Neurology, University Hospital of Strasbourg, Strasbourg, France.
Anna-Elina LehesjokiThe Folkhälsan Institute of Genetics, University of Helsinki, Helsinki, Finland.
Cyril MignotDepartment of Genetics, Center for Rare causes of Intellectual Disabilities and UPMC Research Group "Intellectual Disabilities and Autism", Paris, France.
Alexandra AfenjarAPHP, Genetic Services, Hospital Trousseau, Paris, France.
Gaetan LescaDepartments of Genetics, Lyon University Hospitals, Lyon, France.
Marie-Thérèse Abi-WardeDepartment of Pediatrics, Pediatric Neurology, University Hospital of Strasbourg, Strasbourg, France.
Jamel ChellyDepartment of Translational Medicine and Neurogenetics, Institut Génétique Biologie Moléculaire Cellulaire (IGBMC), Illkirch, France.
Amélie PitonDepartment of Translational Medicine and Neurogenetics, Institut Génétique Biologie Moléculaire Cellulaire (IGBMC), Illkirch, France.
J Lawrence MerrittDivision of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, WA, USA.
Lance H RodanBoston Children's Hospital, Boston, MA, USA.
Wen-Hann TanBoston Children's Hospital, Boston, MA, USA.
Lynne M BirdDivision of Genetics, Department of Pediatrics, Rady Children's Hospital San Diego, University of California San Diego, San Diego, CA, USA.
Mark NespecaDivision of Neurology, Rady Children's Hospital, University of California, San Diego, CA, USA.
Joseph G GleesonRady Children's Institute for Genomic Medicine, Howard Hughes Medical Institute, University of California, San Diego, CA, USA.
Yongjin YooDepartment of Biomedical Sciences, Seoul National University School of Medicine, Seoul, South Korea.
Murim ChoiDepartment of Biomedical Sciences, Seoul National University School of Medicine, Seoul, South Korea.
Jong-Hee ChaeDepartment of Pediatrics, Seoul National University Children's Hospital, Seoul National University School of Medicine, Seoul, South Korea.
Desiree Czapansky-BeilmanPediatric Neurology, Gillette Children's Specialty Healthcare, Burnsville, MN, USA.
Sara Chadwick ReichertChildren's Minnesota, Minneapolis, MN, USA.
Manuela PendziwiatDepartment of Neuropediatrics, University Medical Center Schleswig-Holstein, Kiel, Germany.
Judith S VerhoevenDepartment of Neurology, Academic Center for Epileptology, Heeze, The Netherlands.
Helenius J SchelhaasDepartment of Neurology, Academic Center for Epileptology, Heeze, The Netherlands.
Orrin DevinskyNYU Epilepsy Center, New York, NY, USA.
Jakob ChristensenDepartment of Neurology, Aarhus University Hospital, Aarhus, Denmark.
Nicola SpecchioNeurology Unit, Department of Neuroscience, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.
Marina TrivisanoNeurology Unit, Department of Neuroscience, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.
Yvonne G WeberDepartment of Neurology and Epileptology, Hertie Institute for Clinical Brain Research, University of Tüebingen, Tüebingen, Germany.
Caroline NavaDepartment of Genetics, La Pitié-Salpêtrière Hospital, Assistance Publique-Hôpitaux de Paris, Paris, France.
Boris KerenDepartment of Genetics, La Pitié-Salpêtrière Hospital, Assistance Publique-Hôpitaux de Paris, Paris, France.
Diane DoummarAssistance Publique-Hôpitaux de Paris, Neuropediatric Services, Hospital Armand Trousseau, Paris, France.
Elise SchaeferMedical Genetics, Hôpitaux Universitaires de Strasbourg, Strasbourg, France.
Sarah HopkinsDivision of Neurology, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Holly DubbsDivision of Clinical Genetics, Department of Pediatrics, Columbia University Medical Center, New York, NY, USA.
Jessica E ShawDivision of Clinical Genetics, Department of Pediatrics, Columbia University Medical Center, New York, NY, USA.
Laura PisaniDivision of Clinical Genetics, Department of Pediatrics, Columbia University Medical Center, New York, NY, USA.
Candace T MyersDivision of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, WA, USA.
Sha TangDivision of Clinical Genomics, Ambry Genetics, Aliso Viejo, CA, USA.
Shan TangDepartment of Basic and Clinical Neurosciences, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London, UK.
Deb K PalDepartment of Basic and Clinical Neurosciences, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London, UK.
John J MillichapEpilepsy Center and Division of Neurology, Ann & Robert H. Lurie Children's Hospital of Chicago, Chicago, IL, USA.
Gemma L CarvillNorthwestern University Feinberg School of Medicine, Chicago, IL, USA.
Kathrine L HelbigDivision of Clinical Genomics, Ambry Genetics, Aliso Viejo, CA, USA.
Oriano MecarelliDepartment of Neurology and Psychiatry, Neurophysiopathology and Neuromuscular Diseases, University of Sapeinza, Rome, Italy.
Pasquale StrianoPediatric Neurology and Muscular Diseases Unit, Department of Neurosciences, Rehabilitation, Ophthalmology, Genetics, and Maternal and Child Health, University of Genoa 'G. Gaslini" Institute, Genova, Italy.ORCID 0000-0002-6065-1476
Ingo HelbigDepartment of Neuropediatrics, University Medical Center Schleswig-Holstein, Kiel, Germany.
Guido RubboliThe Danish Epilepsy Center Filadelfia, Dianalund, Denmark.ORCID 0000-0002-5309-2514
Heather C MeffordDivision of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, WA, USA.
Rikke S MøllerThe Danish Epilepsy Center Filadelfia, Dianalund, Denmark.
Columbia University Irving Medical Center · USEpilepsy Foundation · AUKing's College London · GBUniversity of Helsinki · FIUniversity of Southern Denmark · DKUniversity of Washington · USBambino Gesù Children's Hospital · ITBoston Children's Hospital · USCentre National de la Recherche Scientifique · FRChildren's Hospital of Philadelphia · USInstitut de génétique et de biologie moléculaire et cellulaire · FRKempenhaeghe · NLNorthwestern University · USSeoul National University · KRSorbonne Université · FRUniversity of California San Diego · USAarhus University Hospital · DKAmbry Genetics (United States) · USAssistance Publique – Hôpitaux de Paris · FRChildren’s Institute · US

Funding

A Genomic Approach to EpilepsyR01NS069605 · NINDS · UNIVERSITY OF WASHINGTON · PI MEFFORD, HEATHER C. · 2010 to 2019
$4.9M
Medical Research Council MR/J011231/1Medical Research Council MR/N026063/1NINDS NIH HHS R01 NS069605
6 · The paper itself

Abstract

objectivePathogenic SLC6A1 variants were recently described in patients with myoclonic atonic epilepsy (MAE) and intellectual disability (ID). We set out to define the phenotypic spectrum in a larger cohort of SCL6A1-mutated patients.

methodsWe collected 24 SLC6A1 probands and 6 affected family members. Four previously published cases were included for further electroclinical description. In total, we reviewed the electroclinical data of 34 subjects.

resultsCognitive development was impaired in 33/34 (97%) subjects; 28/34 had mild to moderate ID, with language impairment being the most common feature. Epilepsy was diagnosed in 31/34 cases with mean onset at 3.7 years. Cognitive assessment before epilepsy onset was available in 24/31 subjects and was normal in 25% (6/24), and consistent with mild ID in 46% (11/24) or moderate ID in 17% (4/24). Two patients had speech delay only, and 1 had severe ID. After epilepsy onset, cognition deteriorated in 46% (11/24) of cases. The most common seizure types were absence, myoclonic, and atonic seizures. Sixteen cases fulfilled the diagnostic criteria for MAE. Seven further patients had different forms of generalized epilepsy and 2 had focal epilepsy. Twenty of 31 patients became seizure-free, with valproic acid being the most effective drug. There was no clear-cut correlation between seizure control and cognitive outcome. Electroencephalography (EEG) findings were available in 27/31 patients showing irregular bursts of diffuse 2.5-3.5 Hz spikes/polyspikes-and-slow waves in 25/31. Two patients developed an EEG pattern resembling electrical status epilepticus during sleep. Ataxia was observed in 7/34 cases. We describe 7 truncating and 18 missense variants, including 4 recurrent variants (Gly232Val, Ala288Val, Val342Met, and Gly362Arg). SIGNIFICANCE: Most patients carrying pathogenic SLC6A1 variants have an MAE phenotype with language delay and mild/moderate ID before epilepsy onset. However, ID alone or associated with focal epilepsy can also be observed.

Indexed as

AdolescentAdultAnticonvulsantsAtaxiaChildChild, PreschoolCohort StudiesElectroencephalographyEpilepsies, MyoclonicEpilepsies, PartialEpilepsy, GeneralizedFemaleGABA Plasma Membrane Transport ProteinsGenetic Association StudiesHumansIntellectual DisabilityAnticonvulsantsGABA Plasma Membrane Transport ProteinsSLC6A1 protein, humanValproic Acidepilepsyepilepsy geneticsMAESLC6A1

Identifiers

PMID29315614
PMCPMC5912688
OpenAlexW2783266079

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.