Evidence map›Paper›PMID 29315529›Full record

ArticleEcology2018

Mixing alters the lytic activity of viruses in the dark ocean.

Christian Winter, Nicole Köstner, Carl-Philip Kruspe, Damaris Urban, Simone Muck, Thomas Reinthaler, Gerhard J Herndl

Open access · hybridAbstract read
In one paragraph

Article in Ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Christian WinterDepartment of Limnology and Bio-Oceanography, Center of Ecology, University of Vienna, Althanstrasse 14, Vienna, 1090, Austria.ORCID 0000-0001-6327-0209
Nicole KöstnerDepartment of Limnology and Bio-Oceanography, Center of Ecology, University of Vienna, Althanstrasse 14, Vienna, 1090, Austria.
Carl-Philip KruspeDepartment of Limnology and Bio-Oceanography, Center of Ecology, University of Vienna, Althanstrasse 14, Vienna, 1090, Austria.
Damaris UrbanDepartment of Limnology and Bio-Oceanography, Center of Ecology, University of Vienna, Althanstrasse 14, Vienna, 1090, Austria.
Simone MuckDepartment of Limnology and Bio-Oceanography, Center of Ecology, University of Vienna, Althanstrasse 14, Vienna, 1090, Austria.
Thomas ReinthalerDepartment of Limnology and Bio-Oceanography, Center of Ecology, University of Vienna, Althanstrasse 14, Vienna, 1090, Austria.
Gerhard J HerndlDepartment of Limnology and Bio-Oceanography, Center of Ecology, University of Vienna, Althanstrasse 14, Vienna, 1090, Austria.
University of Vienna · AT

Funding

Austrian Science Fund FWF P 24413
6 · The paper itself

Abstract

In aquatic habitats, viral lysis of prokaryotic cells lowers the overall efficiency of the microbial loop, by which dissolved organic carbon is transfered to higher trophic levels. Mixing of water masses in the dark ocean occurs on a global scale and may have far reaching consequences for the different prokaryotic and virus communities found in these waters by altering the environmental conditions these communities experience. We hypothesize that mixing of deep ocean water masses enhances the lytic activity of viruses infecting prokaryotes. To address this hypothesis, major deep-sea water masses of the Atlantic Ocean such as North Atlantic Deep Water, Mediterranean Sea Overflow Water, Antarctic Intermediate Water, and Antarctic Bottom Water were sampled at five locations. Prokaryotic cells from these samples were collected by filtration and subsequently incubated in virus-reduced water from either the same (control) or a different water mass (transplantation treatment). Additionally, mixtures of prokaryotes obtained from two different water masses were incubated in a mixture of virus-reduced water from the same water masses (control) or in virus-reduced water from the source water masses separately (mixing treatments). Pronounced differences in productivity-related parameters (prokaryotic leucine incorporation, prokaryotic and viral abundance) between water masses caused strong changes in viral lysis of prokaryotes. Often, mixing of water masses increased viral lysis of prokaryotes, indicating that lysogenic viruses were induced into the lytic cycle. Mixing-induced changes in viral lysis had a strong effect on the community composition of prokaryotes and viruses. Our data show that mixing of deep-sea water masses alters levels of viral lysis of prokaryotes and in many cases weakens the efficiency of the microbial loop by enhancing the recycling of organic carbon in the deep ocean.

Indexed as

SeawaterVirusesAntarctic RegionsAtlantic OceanBacteriaMediterranean Seadeep oceanfrequency of infected cellsmicrobial loopmixingprokaryotesviral productionviruses

Identifiers

PMID29315529
PMCPMC5905300
OpenAlexW2783676667

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.