Evidence map›Paper›PMID 29312870›Full record

ArticleQuantitative imaging in medicine and surgery2017

Robust principal component analysis in optical micro-angiography.

Nhan Le, Shaozhen Song, Qinqin Zhang, Ruikang K Wang

Abstract read
In one paragraph

Article in Quantitative imaging in medicine and surgery, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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  7. Review
  8. Advances in super-resolution photoacoustic imaging.Quantitative imaging in medicine and surgery · 2018
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nhan LeDepartment of Bioengineering, University of Washington, Seattle, WA, USA.
Shaozhen SongDepartment of Bioengineering, University of Washington, Seattle, WA, USA.
Qinqin ZhangDepartment of Bioengineering, University of Washington, Seattle, WA, USA.
Ruikang K WangDepartment of Bioengineering, University of Washington, Seattle, WA, USA.

Funding

OPTICAL MICROANGIOGRAHY OF CEREBROVASCULAR PERFUSIONR01HL093140 · NHLBI · UNIVERSITY OF WASHINGTON · PI WANG, RUIKANG · 2008 to 2017
$4.2M
NON-INVASIVE REAL-TIME LABEL-FREE 3D IMAGING OF RETINAL MICROCIRCULATIONR01EY024158 · NEI · UNIVERSITY OF WASHINGTON · PI WANG, RUIKANG · 2014 to 2017
$1.7M
NEI NIH HHS R01 EY024158NHLBI NIH HHS R01 HL093140
6 · The paper itself

Abstract

backgroundRecent development of optical micro-angiography (OMAG) utilizes principal component analysis (PCA), where linear-regression filter is employed to separate static and blood flow signals within optical coherence tomography (OCT). While PCA is relatively simple and computationally efficient, the technique is sensitive to and easily skewed by outliers. In this paper, robust PCA (RPCA) is thus introduced to tackle this issue in traditional PCA.

methodsWe first provide brief theoretical background of PCA and RPCA in the context of OMAG where coherent (complex) OCT signals are utilized to contrast blood flow. We then compare PCA and RPCA on sets of 4D-OCT complex data (3 dimensions in space and 1 dimension in time), which are collected from microfluidic phantoms and

resultsIn phantom experiments, both analyses perform relatively well since there are little motion within our observation time window, albeit small tail-noise artifacts from PCA. In nail-fold experiment, PCA suffers from tissue motion, from which RPCA does not seem to be affected. Results from RPCA also show enhancements of other dynamic signals, which are likely from the intercellular fluid. This unwanted result is yet to be proven useful for clinical applications.

conclusionsTraditional PCA method employs linear-regression filter and is sensitive to outliers (tail-noise and motion artifacts). RPCA method is robust against outliers, but is currently computationally expensive.

Indexed as

Eigen decomposition (ED)Optical coherence tomography (OCT)optical microangiographyprincipal component analysis (PCA)robust principal component analysis (RPCA)

Identifiers

PMID29312870
PMCPMC5756790

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.