ReviewFrontiers in plant science2017
From Genomes to GENE-omes: Exome Sequencing Concept and Applications in Crop Improvement.
Review in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed.
- Review
- Signatures of local adaptation to current and future climate in phenology-related genes in natural populations of Quercus robur.BMC genomics · 2024Article
- Dissection of a novel major stable QTL on chromosome 7D for grain hardness and its breeding value estimation in bread wheat.Frontiers in plant science · 2024Article
- Skim exome capture genotyping in wheat.The plant genome · 2023Article
- Boosting wheat functional genomics via an indexed EMS mutant library of KN9204.Plant communications · 2023Article
- Transcript profiling of hairy vetch (Vicia villosa Roth) identified interesting genes for seed dormancy.The plant genome · 2023Article
- Omics-driven exploration and mining of key functional genes for the improvement of food and fiber crops.Frontiers in plant science · 2023Review
- Genetic approaches to exploit landraces for improvement ofFrontiers in plant science · 2023Review
- Molecular Breeding and Drought Tolerance in Chickpea.Life (Basel, Switzerland) · 2022Review
- De novo assembly and characterization of the draft genome of the cashew (Anacardium occidentale L.).Scientific reports · 2022Article
- Host genomic influence on bacterial composition in the switchgrass rhizosphere.Molecular ecology · 2022Article
- The Use and Limitations of Exome Capture to Detect Novel Variation in the Hexaploid Wheat Genome.Frontiers in plant science · 2022Article
- Whole-exome sequencing of selected bread wheat recombinant inbred lines as a useful resource for allele mining and bulked segregant analysis.Frontiers in genetics · 2022Article
- Genotyping by Sequencing Advancements in Barley.Frontiers in plant science · 2022Review
- Genomic signatures of natural selection at phenology-related genes in a widely distributed tree species Fagus sylvatica L.BMC genomics · 2021Article
- De novo assembly and characterization of the first draft genome of quince (Cydonia oblonga Mill.).Scientific reports · 2021Article
- Genome-Wide and Exome-Capturing Sequencing of a Gamma-Ray-Induced Mutant Reveals Biased Variations in Common Wheat.Frontiers in plant science · 2021Article
- Highly Efficient and Comprehensive Identification of Ethyl Methanesulfonate-Induced Mutations inFrontiers in plant science · 2021Article
- Next Generation Sequencing Based Forward Genetic Approaches for Identification and Mapping of Causal Mutations in Crop Plants: A Comprehensive Review.Plants (Basel, Switzerland) · 2020Review
- SECNVs: A Simulator of Copy Number Variants and Whole-Exome Sequences From Reference Genomes.Frontiers in genetics · 2020Article
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2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Exome sequencing represents targeted capture and sequencing of 1-2% of 'high-value genomic regions' (subset of the genome) which are enriched for functional variants and harbors low level of repetitive regions. We discuss here an overview of exome sequencing, ways to approach plant exomes, and advantages and applicability of this powerful approach in deciphering functional regions of genomes. Though initially this approach was developed as an alternative to whole genome sequencing (WGS), but the multitude of benefits conferred by sequence capture via hybridization approaches created a niche for itself to solve many of biological riddles, particularly for resolving phylogenetic distances. The technique has also proved to be successful in understanding the basis of natural and induced molecular variation, marker development and developing genomic resources for complex, wild and non-model species, which are still intractable for WGS efforts. Thus, with profound applications of this powerful sequencing strategy, near future is expected to witness a collective expansion of both techniques, i.e., sequence capture via hybridization for evolutionary and ecological research and WGS approaches for its universal accessibility.
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