Evidence map›Paper›PMID 29312250›Full record

ArticleFrontiers in microbiology2017

Identification of New Degrons in

Nan Liu, Muhammad T Chaudhry, Zhoujie Xie, Jens Kreth, Justin Merritt

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Growth with Commensal Streptococci AltersJournal of dental research · 2023
    Article
  7. Fast friends - Ubiquitin-like modifiers as engineered fusion partners.Seminars in cell & developmental biology · 2022
    Review
  8. Article
  9. Review
  10. Characterization of FtsH Essentiality inFrontiers in genetics · 2021
    Article
  11. Article
  12. Environmental Triggers ofFrontiers in microbiology · 2020
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Nan LiuDepartment of Restorative Dentistry, School of Dentistry, Oregon Health and Science University, Portland, OR, United States.
Muhammad T ChaudhryPakistan Council of Scientific and Industrial Research, Islamabad, Pakistan.
Zhoujie XieMOE Key Laboratory of Industrial Fermentation Microbiology, College of Biotechnology, Tianjin University of Science and Technology, Tianjin, China.
Jens KrethDepartment of Restorative Dentistry, School of Dentistry, Oregon Health and Science University, Portland, OR, United States.
Justin MerrittDepartment of Restorative Dentistry, School of Dentistry, Oregon Health and Science University, Portland, OR, United States.
Oregon Health & Science University · USPakistan Council of Scientific & Industrial Research · PKTianjin University of Science and Technology · CN

Funding

The IrvA-Dependent Pathway: A Link Between Stress Adaptation and VirulenceR01DE018893 · NIDCR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI MERRITT, JUSTIN · 2009 to 2018
$3.0M
Pyruvate oxidase determines ecological fitness of oral streptococciR01DE021726 · NIDCR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI KRETH, JENS · 2014 to 2018
$1.9M
The LytTR Regulatory Systems of Streptococcus mutansR01DE022083 · NIDCR · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI MERRITT, JUSTIN · 2013 to 2016
$1.5M
Pyruvate oxidase determines ecological fitness of oral streptococciR56DE021726 · NIDCR · OREGON HEALTH & SCIENCE UNIVERSITY · PI KRETH, JENS · 2018 to 2018
$545k
NIDCR NIH HHS R01 DE018893NIDCR NIH HHS R01 DE021726NIDCR NIH HHS R01 DE022083NIDCR NIH HHS R56 DE021726
6 · The paper itself

Abstract

Recently, controllable, targeted proteolysis has emerged as one of the most promising new strategies to study essential genes and otherwise toxic mutations. One of the principal limitations preventing the wider adoption of this approach is due to the lack of easily identifiable species-specific degrons that can be used to trigger the degradation of target proteins. Here, we report new advancements in the targeted proteolysis concept by creating the first prokaryotic N-terminal targeted proteolysis system. We demonstrate how proteins from the LexA-like protein superfamily can be exploited as species-specific reservoirs of N- and/or C-degrons, which are easily identifiable due to their proximity to strictly conserved residues found among LexA-like proteins. Using the LexA-like regulator HdiR of

Indexed as

ClpXPdegronFtsHNEDD8protein targetingproteolysisribonucleaseStreptococcus mutans

Identifiers

PMID29312250
PMCPMC5742171
OpenAlexW2776634253

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.