Evidence map›Paper›PMID 29312219›Full record

ArticleFrontiers in microbiology2017

The Cap Snatching of Segmented Negative Sense RNA Viruses as a Tool to Map the Transcription Start Sites of Heterologous Co-infecting Viruses.

Wenzhong Lin, Ping Qiu, Jing Jin, Shunmin Liu, Saif Ul Islam, Jinguang Yang, Jie Zhang, Richard Kormelink, Zhenguo Du, Zujian Wu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Wenzhong LinFujian Province Key Laboratory of Plant Virology, Plant Protection College, Fujian Agriculture and Forestry University, Fuzhou, China.
Ping QiuFujian Province Key Laboratory of Plant Virology, Plant Protection College, Fujian Agriculture and Forestry University, Fuzhou, China.
Jing JinFujian Province Key Laboratory of Plant Virology, Plant Protection College, Fujian Agriculture and Forestry University, Fuzhou, China.
Shunmin LiuFujian Province Key Laboratory of Plant Virology, Plant Protection College, Fujian Agriculture and Forestry University, Fuzhou, China.
Saif Ul IslamFujian Province Key Laboratory of Plant Virology, Plant Protection College, Fujian Agriculture and Forestry University, Fuzhou, China.
Jinguang YangTobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, China.
Jie ZhangFujian Province Key Laboratory of Plant Virology, Plant Protection College, Fujian Agriculture and Forestry University, Fuzhou, China.
Richard KormelinkLaboratory of Virology, Wageningen University and Research Centre, Wageningen, Netherlands.
Zhenguo DuFujian Province Key Laboratory of Plant Virology, Plant Protection College, Fujian Agriculture and Forestry University, Fuzhou, China.
Zujian WuFujian Province Key Laboratory of Plant Virology, Plant Protection College, Fujian Agriculture and Forestry University, Fuzhou, China.
Fujian Agriculture and Forestry University · CNChinese Academy of Agricultural Sciences · CNWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identification of the transcription start sites (TSSs) of a virus is of great importance to understand and dissect the mechanism of viral genome transcription but this often requires costly and laborious experiments. Many segmented negative-sense RNA viruses (sNSVs) cleave capped leader sequences from a large variety of mRNAs and use these cleaved leaders as primers for transcription in a conserved process called cap snatching. The recent developments in high-throughput sequencing have made it possible to determine most, if not all, of the capped RNAs snatched by a sNSV. Here, we show that rice stripe tenuivirus (RSV), a plant-infecting sNSV, co-infects

Indexed as

cap-snatchingco-infectiongeminivirusrice stripe virussNSVtenuivirusTSS

Identifiers

PMID29312219
PMCPMC5735111
OpenAlexW2775096433

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.