Evidence map›Paper›PMID 29309640›Full record

ArticleNucleic acids research2018

A fungal Argonaute interferes with RNA interference.

Quyet Nguyen, Akihide Iritani, Shuhei Ohkita, Ba V Vu, Kana Yokoya, Ai Matsubara, Ken-Ichi Ikeda, Nobuhiro Suzuki, Hitoshi Nakayashiki

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 52 citations in OpenAlex.

  1. Fungal Argonaute proteins act in bidirectional cross-kingdom RNA interference during plant infection.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Review
  3. Argonaute-independent, Dicer-dependent antiviral defense against RNA viruses.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. RNA-Based Control of Fungal Pathogens in Plants.International journal of molecular sciences · 2023
    Review
  10. Article
  11. RNA interference ofFrontiers in microbiology · 2023
    Article
  12. Interference of Small RNAs inJournal of fungi (Basel, Switzerland) · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Mutations in PpAGO3 Lead to Enhanced Virulence ofFrontiers in microbiology · 2022
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Quyet NguyenLaboratory of Cell Function and Structure, Graduate School of Agricultural Science, Kobe University, Nada Kobe 657-8501, Japan.
Akihide IritaniLaboratory of Cell Function and Structure, Graduate School of Agricultural Science, Kobe University, Nada Kobe 657-8501, Japan.
Shuhei OhkitaLaboratory of Cell Function and Structure, Graduate School of Agricultural Science, Kobe University, Nada Kobe 657-8501, Japan.
Ba V VuLaboratory of Cell Function and Structure, Graduate School of Agricultural Science, Kobe University, Nada Kobe 657-8501, Japan.
Kana YokoyaLaboratory of Cell Function and Structure, Graduate School of Agricultural Science, Kobe University, Nada Kobe 657-8501, Japan.
Ai MatsubaraLaboratory of Cell Function and Structure, Graduate School of Agricultural Science, Kobe University, Nada Kobe 657-8501, Japan.
Ken-Ichi IkedaLaboratory of Cell Function and Structure, Graduate School of Agricultural Science, Kobe University, Nada Kobe 657-8501, Japan.
Nobuhiro SuzukiAgrivirology Laboratory, Institute of Plant Science and Resources, Okayama University, Kurashiki, Okayama 710-0046, Japan.
Hitoshi NakayashikiLaboratory of Cell Function and Structure, Graduate School of Agricultural Science, Kobe University, Nada Kobe 657-8501, Japan.
Kobe University · JPOkayama University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small RNA (sRNA)-mediated gene silencing phenomena, exemplified by RNA interference (RNAi), require a unique class of proteins called Argonautes (AGOs). An AGO protein typically forms a protein-sRNA complex that contributes to gene silencing using the loaded sRNA as a specificity determinant. Here, we show that MoAGO2, one of the three AGO genes in the fungus Pyricularia oryzae (Magnaporthe oryzae) interferes with RNAi. Gene knockout (KO) studies revealed that MoAGO1 and MoAGO3 additively or redundantly played roles in hairpin RNA- and retrotransposon (MAGGY)-triggered RNAi while, surprisingly, the KO mutants of MoAGO2 (Δmoago2) showed elevated levels of gene silencing. Consistently, transcript levels of MAGGY and mycoviruses were drastically reduced in Δmoago2, supporting the idea that MoAGO2 impeded RNAi against the parasitic elements. Deep sequencing analysis revealed that repeat- and mycovirus-derived small interfering RNAs were mainly associated with MoAGO2 and MoAGO3, and their populations were very similar based on their size distribution patterns and positional base preference. Site-directed mutagenesis studies indicated that sRNA binding but not slicer activity of MoAGO2 was essential for the ability to diminish the efficacy of RNAi. Overall, these results suggest a possible interplay between distinct sRNA-mediated gene regulation pathways through a competition for sRNA.

Indexed as

RNA InterferenceArgonaute ProteinsAscomycotaCytoplasmic GranulesFungal ProteinsFungal VirusesGene DeletionGenome, FungalRetroelementsRNA, Small InterferingArgonaute ProteinsFungal ProteinsRetroelementsRNA, Small Interfering

Identifiers

PMID29309640
PMCPMC5946944
OpenAlexW2782422250

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.