Evidence map›Paper›PMID 29309624›Full record

ArticleJournal of experimental botany2018

Autophagy is activated and involved in cell death with participation of cathepsins during stress-induced microspore embryogenesis in barley.

Ivett Bárány, Eduardo Berenguer, María-Teresa Solís, Yolanda Pérez-Pérez, M Estrella Santamaría, José Luis Crespo, María C Risueño, Isabel Díaz, Pilar S Testillano

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 76 citations in OpenAlex.

  1. Guideline
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  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Plant cathepsin B, a versatile protease.Frontiers in plant science · 2024
    Review
  15. Article
  16. The Roads to Haploid Embryogenesis.Plants (Basel, Switzerland) · 2023
    Review
  17. Review
  18. Review
  19. Autophagy in the Lifetime of Plants: From Seed to Seed.International journal of molecular sciences · 2022
    Review
  20. The Key Role of Lysosomal Protease Cathepsins in Viral Infections.International journal of molecular sciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Ivett BárányBiological Research Center, CIB, Madrid, Spain.
Eduardo BerenguerBiological Research Center, CIB, Madrid, Spain.
María-Teresa SolísBiological Research Center, CIB, Madrid, Spain.
Yolanda Pérez-PérezBiological Research Center, CIB, Madrid, Spain.
M Estrella SantamaríaCenter of Plant Biotechnology and Genomics, CBGP, UPM, Madrid, Spain.
José Luis CrespoInstitute of Plant Biochemistry and Photosynthesis, IBVF, CSIC, Seville, Spain.
María C RisueñoBiological Research Center, CIB, Madrid, Spain.
Isabel DíazCenter of Plant Biotechnology and Genomics, CBGP, UPM, Madrid, Spain.
Pilar S TestillanoBiological Research Center, CIB, Madrid, Spain.
Centro de Investigaciones Biológicas Margarita Salas · ESCentre for Plant Biotechnology and Genomics · ESInstituto de Bioquímica Vegetal y Fotosíntesis · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microspores are reprogrammed towards embryogenesis by stress. Many microspores die after this stress, limiting the efficiency of microspore embryogenesis. Autophagy is a degradation pathway that plays critical roles in stress response and cell death. In animals, cathepsins have an integral role in autophagy by degrading autophagic material; less is known in plants. Plant cathepsins are papain-like C1A cysteine proteases involved in many physiological processes, including programmed cell death. We have analysed the involvement of autophagy in cell death, in relation to cathepsin activation, during stress-induced microspore embryogenesis in Hordeum vulgare. After stress, reactive oxygen species (ROS) and cell death increased and autophagy was activated, including HvATG5 and HvATG6 up-regulation and increase of ATG5, ATG8, and autophagosomes. Concomitantly, cathepsin L/F-, B-, and H-like activities were induced, cathepsin-like genes HvPap-1 and HvPap-6 were up-regulated, and HvPap-1, HvPap-6, and HvPap-19 proteins increased and localized in the cytoplasm, resembling autophagy structures. Inhibitors of autophagy and cysteine proteases reduced cell death and promoted embryogenesis. The findings reveal a role for autophagy in stress-induced cell death during microspore embryogenesis, and the participation of cathepsins. Similar patterns of activation, expression, and localization suggest a possible connection between cathepsins and autophagy. The results open up new possibilities to enhance microspore embryogenesis efficiency with autophagy and/or cysteine protease modulators.

Indexed as

AutophagyCell DeathGene Expression Regulation, PlantCathepsinsHordeumPollenStress, PhysiologicalCathepsins

Identifiers

PMID29309624
PMCPMC6019037
OpenAlexW2782163584

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.