Evidence map›Paper›PMID 29309035›Full record

ArticleeLife2018

Dissection of affinity captured LINE-1 macromolecular complexes.

Martin S Taylor, Ilya Altukhov, Kelly R Molloy, Paolo Mita, Hua Jiang, Emily M Adney, Aleksandra Wudzinska, Sana Badri, Dmitry Ischenko, George Eng and 7 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
16.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. LINE-1 Retrotransposons and Amyotrophic Lateral Sclerosis.International journal of molecular sciences · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. From the genome's perspective: Bearing somatic retrotransposition to leverage the regulatory potential of L1 RNAs.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 2 countries.

Martin S Taylor *Department of Pathology, Massachusetts General Hospital, Boston, United States.ORCID http://orcid.org/0000-0001-5824-142X
Ilya Altukhov *Moscow Institute of Physics and Technology, Dolgoprudny, Russia.ORCID https://orcid.org/0000-0001-9821-1890
Kelly R Molloy *Laboratory of Mass Spectrometry and Gaseous Ion Chemistry, The Rockefeller University, New York, United States.
Paolo MitaDepartment of Biochemistry and Molecular Pharmacology, Institute for Systems Genetics, NYU Langone Health, New York, United States.ORCID http://orcid.org/0000-0002-2093-4906
Hua JiangLaboratory of Cellular and Structural Biology, The Rockefeller University, New York, United States.
Emily M AdneyDepartment of Biochemistry and Molecular Pharmacology, Institute for Systems Genetics, NYU Langone Health, New York, United States.
Aleksandra WudzinskaMcKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, United States.
Sana BadriDepartment of Pathology, NYU Langone Health, New York, United States.
Dmitry IschenkoMoscow Institute of Physics and Technology, Dolgoprudny, Russia.
George EngDepartment of Pathology, Massachusetts General Hospital, Boston, United States.
Kathleen H BurnsLaboratory of Cellular and Structural Biology, The Rockefeller University, New York, United States.ORCID https://orcid.org/0000-0003-1620-3761
David FenyöDepartment of Biochemistry and Molecular Pharmacology, Institute for Systems Genetics, NYU Langone Health, New York, United States.ORCID http://orcid.org/0000-0001-5049-3825
Brian T ChaitLaboratory of Mass Spectrometry and Gaseous Ion Chemistry, The Rockefeller University, New York, United States.
Dmitry AlexeevNovosibirsk State University, Novosibirsk, Russia.ORCID http://orcid.org/0000-0003-0783-1176
Michael P RoutLaboratory of Cellular and Structural Biology, The Rockefeller University, New York, United States.
Jef D BoekeDepartment of Biochemistry and Molecular Pharmacology, Institute for Systems Genetics, NYU Langone Health, New York, United States.ORCID http://orcid.org/0000-0001-5322-4946
John LaCavaDepartment of Biochemistry and Molecular Pharmacology, Institute for Systems Genetics, NYU Langone Health, New York, United States.ORCID http://orcid.org/0000-0002-6307-7713
Institute for Systems Biology · USRockefeller University · USJohns Hopkins University · USMassachusetts General Hospital · USMoscow Institute of Physics and Technology · RUNovosibirsk State University · RUNYU Langone Health · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ANIRBAN MAITRA · 1985 to 2026
$83.1M
Somatic Activation of Retrotransposition: A New Molecular Mechanism of Aging?P01AG051449 · NIA · BROWN UNIVERSITY · PI John M Sedivy · 2016 to 2026
$30.4M
TR&D Project 4. The Imaging Stage: Multiscale Spatiotemporal Modeling of Macromolecular Systems in Cellular NeighborhoodsP41GM109824 · NIGMS · ROCKEFELLER UNIVERSITY · PI ROUT, MICHAEL P · 2014 to 2023
$18.8M
Training CoreP50GM107632 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BOEKE, JEF D · 2013 to 2017
$10.0M
National Resource for Mass Spectrom of Biological MacromoleculesP41GM103314 · NIGMS · ROCKEFELLER UNIVERSITY · PI CHAIT, BRIAN T · 2012 to 2017
$9.9M
Demonstrating interactome-level connections between Alzheimer disease, LINE-1 retrotransposons, and cellular senescenceR01GM126170 · NIGMS · ROCKEFELLER UNIVERSITY · PI LACAVA, JOHN · 2018 to 2021
$2.4M
Acquisition of an Orbitrap Elite Mass Spectrometer with ETDS10OD010582 · OD · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI UEBERHEIDE, BEATRIX MAGDALENA · 2013 to 2013
$600k
NCI NIH HHS P30 CA016087NIGMS NIH HHS P41 GM103314NIGMS NIH HHS P41GM103314NIGMS NIH HHS P41 GM109824NIGMS NIH HHS P41GM109824NIGMS NIH HHS P50 GM107632NIGMS NIH HHS P50GM107632NIGMS NIH HHS R01 GM126170NIGMS NIH HHS R01GM126170NIH HHS S10 OD010582
6 · The paper itself

Abstract

Long Interspersed Nuclear Element-1 (LINE-1, L1) is a mobile genetic element active in human genomes. L1-encoded ORF1 and ORF2 proteins bind L1 RNAs, forming ribonucleoproteins (RNPs). These RNPs interact with diverse host proteins, some repressive and others required for the L1 lifecycle. Using differential affinity purifications, quantitative mass spectrometry, and next generation RNA sequencing, we have characterized the proteins and nucleic acids associated with distinctive, enzymatically active L1 macromolecular complexes. Among them, we describe a cytoplasmic intermediate that we hypothesize to be the canonical ORF1p/ORF2p/L1

Indexed as

Long Interspersed Nucleotide ElementsChromatography, AffinityEndonucleasesHeLa CellsHumansMacromolecular SubstancesMass SpectrometryRibonucleoproteinsRNARNA-Directed DNA PolymeraseEndonucleasesL1 ORF1 protein, humanL1 ORF2 protein, humanMacromolecular SubstancesRibonucleoproteinsRNARNA-Directed DNA Polymeraseaffinity proteomicsbiochemistrychemical biologycomputational biologyhumaninteractomeLINE-1retrotransposonribonucleoproteinsystems biology

Identifiers

PMID29309035
PMCPMC5821459
OpenAlexW2781922600

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.