ArticleBMC genomics2018
The complete and fully assembled genome sequence of Aeromonas salmonicida subsp. pectinolytica and its comparative analysis with other Aeromonas species: investigation of the mobilome in environmental and pathogenic strains.
Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
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- Novel resistance ICEs carrying theAntimicrobial agents and chemotherapy · 2024Article
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- Recoding UAG to selenocysteine inRNA (New York, N.Y.) · 2023Article
- A Wild Rice RhizobacteriumInternational journal of molecular sciences · 2022Article
- Comparative Genomics of Typical and AtypicalMicroorganisms · 2022Article
- Colistin Resistance Mechanisms in HumanAntibiotics (Basel, Switzerland) · 2022Article
- Images of the month: Intrahepatic multiple low-signal lesions fromClinical medicine (London, England) · 2020Article
- Recent Insights intoJournal of microbiology and biotechnology · 2020Review
- Whole-genome comparison between the type strain of Halobacterium salinarum (DSM 3754MicrobiologyOpen · 2020Article
- First hybrid complete genome ofAccess microbiology · 2020Article
- Mobilome ofFrontiers in microbiology · 2019Article
- Combining sequencing approaches to fully resolve a carbapenemase-encoding megaplasmid in aEmerging microbes & infections · 2019Article
- Phenotypic and genomic comparison of Photorhabdus luminescens subsp. laumondii TT01 and a widely used rifampicin-resistant Photorhabdus luminescens laboratory strain.BMC genomics · 2018Article
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7 authors.
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Abstract
backgroundDue to the predominant usage of short-read sequencing to date, most bacterial genome sequences reported in the last years remain at the draft level. This precludes certain types of analyses, such as the in-depth analysis of genome plasticity.
resultsHere we report the finalized genome sequence of the environmental strain Aeromonas salmonicida subsp. pectinolytica 34mel, for which only a draft genome with 253 contigs is currently available. Successful completion of the transposon-rich genome critically depended on the PacBio long read sequencing technology. Using finalized genome sequences of A. salmonicida subsp. pectinolytica and other Aeromonads, we report the detailed analysis of the transposon composition of these bacterial species. Mobilome evolution is exemplified by a complex transposon, which has shifted from pathogenicity-related to environmental-related gene content in A. salmonicida subsp. pectinolytica 34mel.
conclusionObtaining the complete, circular genome of A. salmonicida subsp. pectinolytica allowed us to perform an in-depth analysis of its mobilome. We demonstrate the mobilome-dependent evolution of this strain's genetic profile from pathogenic to environmental.
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