Evidence map›Paper›PMID 29302836›Full record

ArticleMolecular and cellular biochemistry2018

Proteomic analysis of cardiac ventricles: baso-apical differences.

Adam Eckhardt, Lucie Kulhava, Ivan Miksik, Statis Pataridis, Marketa Hlavackova, Jana Vasinova, Frantisek Kolar, David Sedmera, Bohuslav Ostadal

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Article in Molecular and cellular biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
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  4. Review
  5. Cardioprotection in right heart failure.British journal of pharmacology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Adam EckhardtInstitute of Physiology of the Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic. adam.eckhardt@fgu.cas.cz.ORCID http://orcid.org/0000-0003-4757-5226
Lucie KulhavaInstitute of Physiology of the Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic.
Ivan MiksikInstitute of Physiology of the Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic.
Statis PataridisInstitute of Physiology of the Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic.
Marketa HlavackovaInstitute of Physiology of the Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic.
Jana VasinovaInstitute of Physiology of the Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic.
Frantisek KolarInstitute of Physiology of the Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic.
David SedmeraInstitute of Physiology of the Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic.
Bohuslav OstadalInstitute of Physiology of the Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic.
Czech Academy of Sciences · CZ

Funding

Czech Science Foundation 16-12420YGrantová Agentura České Republiky 13-12412SGrantová Agentura České Republiky 16-02972SGrantová Agentura, Univerzita Karlova 322216Grantová Agentura, Univerzita Karlova SVV 260440
6 · The paper itself

Abstract

The heart is characterized by a remarkable degree of heterogeneity. Since different cardiac pathologies affect different cardiac regions, it is important to understand molecular mechanisms by which these parts respond to pathological stimuli. In addition to already described left ventricular (LV)/right ventricular (RV) and transmural differences, possible baso-apical heterogeneity has to be taken into consideration. The aim of our study has been, therefore, to compare proteomes in the apical and basal parts of the rat RV and LV. Two-dimensional electrophoresis was used for the proteomic analysis. The major result of this study has revealed for the first time significant baso-apical differences in concentration of several proteins, both in the LV and RV. As far as the LV is concerned, five proteins had higher concentration in the apical compared to basal part of the ventricle. Three of them are mitochondrial and belong to the "metabolism and energy pathways" (myofibrillar creatine kinase M-type, L-lactate dehydrogenase, dihydrolipoamide dehydrogenase). Myosin light chain 3 is a contractile protein and HSP60 belongs to heat shock proteins. In the RV, higher concentration in the apical part was observed in two mitochondrial proteins (creatine kinase S-type and proton pumping NADH:ubiquinone oxidoreductase). The described changes were more pronounced in the LV, which is subjected to higher workload. However, in both chambers was the concentration of proteins markedly higher in the apical than that in basal part, which corresponds to the higher energetic demand and contractile activity of these segments of both ventricles.

Indexed as

ProteomicsAnimalsChaperonin 60Chromatography, LiquidCreatine Kinase, MM FormDihydrolipoamide DehydrogenaseElectron Transport Complex IElectrophoresis, Gel, Two-DimensionalEnergy MetabolismHeart VentriclesL-Lactate DehydrogenaseMaleMitochondrial ProteinsMuscle ProteinsMyosin Light ChainsRats, WistarChaperonin 60Creatine Kinase, MM FormDihydrolipoamide DehydrogenaseElectron Transport Complex IHspd1 protein, ratL-Lactate DehydrogenaseMitochondrial ProteinsMuscle ProteinsMyosin Light ChainsHeartMyocardial heterogeneityProteomicsTwo-dimensional electrophoresisVentricleVentricular myocardium

Identifiers

PMID29302836
OpenAlexW2782440703

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.