ArticlePeerJ2017
Phylogenic study of Lemnoideae (duckweeds) through complete chloroplast genomes for eight accessions.
Article in PeerJ, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed, 26 citations in OpenAlex.
- Duckweed Evolution: from Land back to Water.Genomics, proteomics & bioinformatics · 2025Article
- Heavy metals/-metalloids (As) phytoremediation with Landoltia punctata and Lemna sp. (duckweeds): coupling with biorefinery prospects for sustainable phytotechnologies.Environmental science and pollution research international · 2024Review
- The complete chloroplast genome sequence ofMitochondrial DNA. Part B, Resources · 2024Article
- Characterization of the Chloroplast Genome ofGenes · 2022Article
- Biodiversity of Duckweed (Lemnaceae) in Water Reservoirs of Ukraine and China Assessed by Chloroplast DNA Barcoding.Plants (Basel, Switzerland) · 2022Article
- Morphological Characterization and DNA Barcoding of Duckweed Species in Saudi Arabia.Plants (Basel, Switzerland) · 2021Article
- Return of the Lemnaceae: duckweed as a model plant system in the genomics and postgenomics era.The Plant cell · 2021Article
- Research Progress of a Potential Bioreactor: Duckweed.Biomolecules · 2021Review
- Aquatic Plants,Plants (Basel, Switzerland) · 2020Article
- Article
- Article
- Phylogenetic analysis ofPeerJ · 2019Article
Corrections and comments
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Authors and funding
7 authors at 4 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundPhylogenetic relationship within different genera of Lemnoideae, a kind of small aquatic monocotyledonous plants, was not well resolved, using either morphological characters or traditional markers. Given that rich genetic information in chloroplast genome makes them particularly useful for phylogenetic studies, we used chloroplast genomes to clarify the phylogeny within Lemnoideae.
methodsDNAs were sequenced with next-generation sequencing. The duckweeds chloroplast genomes were indirectly filtered from the total DNA data, or directly obtained from chloroplast DNA data. To test the reliability of assembling the chloroplast genome based on the filtration of the total DNA, two methods were used to assemble the chloroplast genome of
resultsEight complete duckweeds chloroplast genomes were assembled, with lengths ranging from 165,775 bp to 171,152 bp, and each contains 80 protein-coding sequences, four rRNAs, 30 tRNAs and two pseudogenes. The identity of DISCUSSION: This study demonstrates potential of whole chloroplast genome DNA as an effective option for phylogenetic studies of Lemnoideae. It also showed the possibility of using chloroplast DNA data to elucidate those phylogenies which were not yet solved well by traditional methods even in plants other than duckweeds.
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