Evidence map›Paper›PMID 29301959›Full record

ArticleScience (New York, N.Y.)2018

Multiplexed gene synthesis in emulsions for exploring protein functional landscapes.

Calin Plesa, Angus M Sidore, Nathan B Lubock, Di Zhang, Sriram Kosuri

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Scaling DNA engineering.Trends in biotechnology · 2025
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. The lives of cells, recorded.Nature reviews. Genetics · 2025
    Review
  17. Article
  18. Article
  19. GGAssembler: Precise and economical design and synthesis of combinatorial mutation libraries.Protein science : a publication of the Protein Society · 2024
    Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Calin PlesaDepartment of Chemistry and Biochemistry, University of California, Los Angeles (UCLA), Los Angeles, CA, USA.ORCID 0000-0002-8121-3344
Angus M SidoreDepartment of Chemical and Biomolecular Engineering, UCLA, Los Angeles, CA, USA.ORCID 0000-0003-2105-2814
Nathan B LubockDepartment of Chemistry and Biochemistry, University of California, Los Angeles (UCLA), Los Angeles, CA, USA.ORCID 0000-0001-8064-2465
Di ZhangGenomics and Computational Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Sriram KosuriDepartment of Chemistry and Biochemistry, University of California, Los Angeles (UCLA), Los Angeles, CA, USA.ORCID 0000-0002-4661-0600

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
REVERSE GENOMICS OF REGULATORY ELEMENTS GOVERNING SPLICINGDP2GM114829 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KOSURI, SRIRAM · 2014 to 2014
$2.3M
NIGMS NIH HHS DP2 GM114829NIGMS NIH HHS T32 GM007185
6 · The paper itself

Abstract

Improving our ability to construct and functionally characterize DNA sequences would broadly accelerate progress in biology. Here, we introduce DropSynth, a scalable, low-cost method to build thousands of defined gene-length constructs in a pooled (multiplexed) manner. DropSynth uses a library of barcoded beads that pull down the oligonucleotides necessary for a gene's assembly, which are then processed and assembled in water-in-oil emulsions. We used DropSynth to successfully build more than 7000 synthetic genes that encode phylogenetically diverse homologs of two essential genes in

Indexed as

Genes, SyntheticEmulsionsEscherichia coliGene Knockout TechniquesGenes, EssentialGenetic Complementation TestOligonucleotidesProteinsSynthetic BiologyEmulsionsOligonucleotidesProteins

Identifiers

PMID29301959
PMCPMC6261299

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.