Evidence map›Paper›PMID 29301490›Full record

ArticleBMC genomics2018

Molecular characterization of larval development from fertilization to metamorphosis in a reef-building coral.

Marie E Strader, Galina V Aglyamova, Mikhail V Matz

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 64 citations in OpenAlex.

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  18. Life-history traits ofEcology and evolution · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Marie E StraderDepartment of Integrative Biology, The University of Texas at Austin, 1 University Station C0990, Austin, TX, 78712, USA. stradermarie@gmail.com.ORCID 0000-0002-1886-4187
Galina V AglyamovaDepartment of Integrative Biology, The University of Texas at Austin, 1 University Station C0990, Austin, TX, 78712, USA.
Mikhail V MatzDepartment of Integrative Biology, The University of Texas at Austin, 1 University Station C0990, Austin, TX, 78712, USA.
The University of Texas at Austin · US

Funding

National Science Foundation DEB-1501463
6 · The paper itself

Abstract

backgroundMolecular mechanisms underlying coral larval competence, the ability of larvae to respond to settlement cues, determine their dispersal potential and are potential targets of natural selection. Here, we profiled competence, fluorescence and genome-wide gene expression in embryos and larvae of the reef-building coral Acropora millepora daily throughout 12 days post-fertilization.

resultsGene expression associated with competence was positively correlated with transcriptomic response to the natural settlement cue, confirming that mature coral larvae are "primed" for settlement. Rise of competence through development was accompanied by up-regulation of sensory and signal transduction genes such as ion channels, genes involved in neuropeptide signaling, and G-protein coupled receptor (GPCRs). A drug screen targeting components of GPCR signaling pathways confirmed a role in larval settlement behavior and metamorphosis.

conclusionsThese results gives insight into the molecular complexity underlying these transitions and reveals receptors and pathways that, if altered by changing environments, could affect dispersal capabilities of reef-building corals. In addition, this dataset provides a toolkit for asking broad questions about sensory capacity in multicellular animals and the evolution of development.

Indexed as

AnimalsAnthozoaBehavior, AnimalFertilizationLarvaLuminescent ProteinsMetamorphosis, BiologicalTranscriptomeLuminescent ProteinsCompetenceCoralDispersalFluorescenceGene expressionLarval development

Identifiers

PMID29301490
PMCPMC5755313
OpenAlexW2782024581

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.