Evidence map›Paper›PMID 29300825›Full record

ArticleAnnals of botany2018

The Arabidopsis thaliana non-specific phospholipase C2 is involved in the response to Pseudomonas syringae attack.

Zuzana Krcková, Daniela Kocourková, Michal Danek, Jitka Brouzdová, Premysl Pejchar, Martin Janda, Igor Pokotylo, Peter G Ott, Olga Valentová, Jan Martinec

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 35 citations in OpenAlex.

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  12. Identification of miRNA and their target genes inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022
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  14. Characterization of theFrontiers in plant science · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Zuzana KrckováInstitute of Experimental Botany of the Czech Academy of Sciences, Czech Republic.
Daniela KocourkováInstitute of Experimental Botany of the Czech Academy of Sciences, Czech Republic.
Michal DanekInstitute of Experimental Botany of the Czech Academy of Sciences, Czech Republic.
Jitka BrouzdováInstitute of Experimental Botany of the Czech Academy of Sciences, Czech Republic.
Premysl PejcharInstitute of Experimental Botany of the Czech Academy of Sciences, Czech Republic.
Martin JandaInstitute of Experimental Botany of the Czech Academy of Sciences, Czech Republic.
Igor PokotyloThe Institute of Bioorganic Chemistry and Petrochemistry, National Academy of Sciences of Ukraine, Ukraine.
Peter G OttPlant Protection Institute, Centre for Agricultural Research, Hungarian Academy of Sciences, Hungary.
Olga ValentováDepartment of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Czech Republic.
Jan MartinecInstitute of Experimental Botany of the Czech Academy of Sciences, Czech Republic.
Czech Academy of Sciences, Institute of Experimental Botany · CZCentre for Agricultural Research · HUNational Academy of Sciences of Ukraine · UAUniversity of Chemistry and Technology, Prague · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background and Aims: The non-specific phospholipase C (NPC) is a new member of the plant phospholipase family that reacts to abiotic environmental stresses, such as phosphate deficiency, high salinity, heat and aluminium toxicity, and is involved in root development, silicon distribution and brassinolide signalling. Six NPC genes (NPC1-NPC6) are found in the Arabidopsis genome. The NPC2 isoform has not been experimentally characterized so far. Methods: The Arabidopsis NPC2 isoform was cloned and heterologously expressed in Escherichia coli. NPC2 enzyme activity was determined using fluorescent phosphatidylcholine as a substrate. Tissue expression and subcellular localization were analysed using GUS- and GFP-tagged NPC2. The expression patterns of NPC2 were analysed via quantitative real-time PCR. Independent homozygous transgenic plant lines overexpressing NPC2 under the control of a 35S promoter were generated, and reactive oxygen species were measured using a luminol-based assay. Key Results: The heterologously expressed protein possessed phospholipase C activity, being able to hydrolyse phosphatidylcholine to diacylglycerol. NPC2 tagged with GFP was predominantly localized to the Golgi apparatus in Arabidopsis roots. The level of NPC2 transcript is rapidly altered during plant immune responses and correlates with the activation of multiple layers of the plant defence system. Transcription of NPC2 decreased substantially after plant infiltration with Pseudomonas syringae, flagellin peptide flg22 and salicylic acid treatments and expression of the effector molecule AvrRpm1. The decrease in NPC2 transcript levels correlated with a decrease in NPC2 enzyme activity. NPC2-overexpressing mutants showed higher reactive oxygen species production triggered by flg22. Conclusions: This first experimental characterization of NPC2 provides new insights into the role of the non-specific phospholipase C protein family. The results suggest that NPC2 is involved in the response of Arabidopsis to P. syringae attack.

Indexed as

Pseudomonas syringaeArabidopsisArabidopsis ProteinsCloning, MolecularGene Expression Regulation, PlantGolgi ApparatusMicroscopy, ConfocalPhosphatidylcholinesPlant DiseasesPlant ImmunityProtoplastsReactive Oxygen SpeciesReal-Time Polymerase Chain ReactionType C PhospholipasesArabidopsis ProteinsNPC2 protein, ArabidopsisPhosphatidylcholinesReactive Oxygen SpeciesType C PhospholipasesArabidopsis thalianaeffector-triggered immunityflagellinMAMP-triggered immunitynon-specific phospholipase Cphosphatidylcholine-specific phospholipase CPseudomonas syringaereactive oxygen species

Identifiers

PMID29300825
PMCPMC5808806
OpenAlexW2776577946

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.