Evidence map›Paper›PMID 29298974›Full record

ArticleNature communications2018

The protease GtgE from Salmonella exclusively targets inactive Rab GTPases.

Rudolf Wachtel, Bastian Bräuning, Sophie L Mader, Felix Ecker, Ville R I Kaila, Michael Groll, Aymelt Itzen

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Host prenylation promotes membrane association of theMicrobiology (Reading, England) · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Infection biology ofEcoSal Plus · 2024
    Review
  9. Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Functional Divergence of the ParalogInternational journal of molecular sciences · 2024
    Review
  11. How Bacterial Pathogens Coordinate Appetite with Virulence.Microbiology and molecular biology reviews : MMBR · 2023
    Review
  12. FromACS omega · 2023
    Review
  13. Paired single-cell host profiling with multiplex-tagged bacterial mutants reveals intracellular virulence-immune networks.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Speaking the host language: howMicrobiology (Reading, England) · 2023
    Review
  15. Article
  16. Review
  17. Structural and functional study of Legionella pneumophila effector RavA.Protein science : a publication of the Protein Society · 2021
    Article
  18. Article
  19. Proteolysis of Rab32 byiScience · 2021
    Article
  20. TheFrontiers in cellular and infection microbiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Rudolf WachtelCenter for Integrated Protein Science Munich (CIPSM), Department Chemistry, Technical University of Munich, Lichtenbergstrasse 4, 85747, Garching, Germany.ORCID http://orcid.org/0000-0002-8032-4229
Bastian BräuningCenter for Integrated Protein Science Munich (CIPSM), Department Chemistry, Technical University of Munich, Lichtenbergstrasse 4, 85747, Garching, Germany.ORCID http://orcid.org/0000-0002-7194-2500
Sophie L MaderCenter for Integrated Protein Science Munich (CIPSM), Department Chemistry, Technical University of Munich, Lichtenbergstrasse 4, 85747, Garching, Germany.ORCID http://orcid.org/0000-0002-3011-3319
Felix EckerCenter for Integrated Protein Science Munich (CIPSM), Department Chemistry, Technical University of Munich, Lichtenbergstrasse 4, 85747, Garching, Germany.
Ville R I KailaCenter for Integrated Protein Science Munich (CIPSM), Department Chemistry, Technical University of Munich, Lichtenbergstrasse 4, 85747, Garching, Germany.ORCID http://orcid.org/0000-0003-4464-6324
Michael GrollCenter for Integrated Protein Science Munich (CIPSM), Department Chemistry, Technical University of Munich, Lichtenbergstrasse 4, 85747, Garching, Germany.
Aymelt ItzenCenter for Integrated Protein Science Munich (CIPSM), Department Chemistry, Technical University of Munich, Lichtenbergstrasse 4, 85747, Garching, Germany. aymelt.itzen@tum.de.ORCID http://orcid.org/0000-0002-4249-5617
Center for Integrated Protein Science Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salmonella infections require the delivery of bacterial effectors into the host cell that alter the regulation of host defense mechanisms. The secreted cysteine protease GtgE from S. Typhimurium manipulates vesicular trafficking by modifying the Rab32 subfamily via cleaving the regulatory switch I region. Here we present a comprehensive biochemical, structural, and computational characterization of GtgE in complex with Rab32. Interestingly, GtgE solely processes the inactive GDP-bound GTPase. The crystal structure of the Rab32:GDP substrate in complex with the inactive mutant GtgE

Indexed as

Bacterial ProteinsCysteine ProteasesMolecular Dynamics SimulationProtein Conformationrab GTP-Binding ProteinsSalmonella entericaBacterial ProteinsCysteine ProteasesRab32 protein, humanrab GTP-Binding ProteinsSopD protein, Salmonella

Identifiers

PMID29298974
PMCPMC5752668
OpenAlexW2776438024

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.