Evidence map›Paper›PMID 29297384›Full record

ArticleBMC genetics2017

Upregulation of NETO2 gene in colorectal cancer.

Maria S Fedorova, Anastasiya V Snezhkina, Elena A Pudova, Ivan S Abramov, Anastasiya V Lipatova, Sergey L Kharitonov, Asiya F Sadritdinova, Kirill M Nyushko, Kseniya M Klimina, Mikhail M Belyakov and 9 more

Open access · diamondAbstract read
In one paragraph

Article in BMC genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Effect of PIERCE1 on colorectal cancer.Experimental animals · 2020
    Article
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  6. Frontiers in genetics · 2020
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  7. Mutational load in carotid body tumor.BMC medical genomics · 2019
    Article
  8. Article
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  10. Cancer management and research · 2019
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 1 country.

Maria S FedorovaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Anastasiya V SnezhkinaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Elena A PudovaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Ivan S AbramovEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Anastasiya V LipatovaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Sergey L KharitonovEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Asiya F SadritdinovaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Kirill M NyushkoNational Medical Research Radiological Center, Ministry of Health of the Russian Federation, Moscow, Russia.
Kseniya M KliminaVavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.
Mikhail M BelyakovNational Medical Research Radiological Center, Ministry of Health of the Russian Federation, Moscow, Russia.
Elena N SlavnovaNational Medical Research Radiological Center, Ministry of Health of the Russian Federation, Moscow, Russia.
Nataliya V MelnikovaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Maria A ChernichenkoNational Medical Research Radiological Center, Ministry of Health of the Russian Federation, Moscow, Russia.
Dmitry V SidorovNational Medical Research Radiological Center, Ministry of Health of the Russian Federation, Moscow, Russia.
Marina V KiselevaNational Medical Research Radiological Center, Ministry of Health of the Russian Federation, Moscow, Russia.
Andrey D KaprinNational Medical Research Radiological Center, Ministry of Health of the Russian Federation, Moscow, Russia.
Boris Y AlekseevNational Medical Research Radiological Center, Ministry of Health of the Russian Federation, Moscow, Russia.
Alexey A DmitrievEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
Anna V KudryavtsevaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia. rhizamoeba@mail.ru.
Engelhardt Institute of Molecular Biology · RUMinistry of Health of the Russian Federation · RUVavilov Institute of General Genetics · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNeuropilin and tolloid-like 2 (NETO2) is a single-pass transmembrane protein that has been shown primarily implicated in neuron-specific processes. Upregulation of NETO2 gene was also detected in several cancer types. In colorectal cancer (CRC), it was associated with tumor progression, invasion, and metastasis, and seems to be involved in epithelial-mesenchymal transition (EMT). However, the mechanism of NETO2 action is still poorly understood.

resultsWe have revealed significant increase in the expression of NETO2 gene and deregulation of eight EMT-related genes in CRC. Four of them were upregulated (TWIST1, SNAIL1, LEF1, and FOXA2); the mRNA levels of other genes (FOXA1, BMP2, BMP5, and SMAD7) were decreased. Expression of NETO2 gene was weakly correlated with that of genes involved in the EMT process.

conclusionsWe found considerable NETO2 upregulation, but no significant correlation between the expression of NETO2 and EMT-related genes in CRC. Thus, NETO2 may be involved in CRC progression, but is not directly associated with EMT.

Indexed as

Gene Expression Regulation, NeoplasticColorectal NeoplasmsDisease ProgressionEpithelial-Mesenchymal TransitionFemaleHumansMaleMembrane ProteinsMiddle AgedUp-RegulationMembrane ProteinsNETO2 protein, humanColorectal cancerEpithelial-mesenchymal transitionGene expressionNETO2QPCR

Identifiers

PMID29297384
PMCPMC5751543
OpenAlexW2781008432

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.