ArticleBMC bioinformatics2017
Combining agent based-models and virtual screening techniques to predict the best citrus-derived vaccine adjuvants against human papilloma virus.
Article in BMC bioinformatics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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Who cites it
11 citing papers in PubMed.
- Model verification tools: a computational framework for verification assessment of mechanistic agent-based models.BMC bioinformatics · 2022Article
- Natural Bioactives: Back to the Future in the Fight against Human Papillomavirus? A Narrative Review.Journal of clinical medicine · 2022Review
- Scientific and regulatory evaluation of mechanistic in silico drug and disease models in drug development: Building model credibility.CPT: pharmacometrics & systems pharmacology · 2021Article
- Bayesian Augmented Clinical Trials in TB Therapeutic Vaccination.Frontiers in medical technology · 2021Article
- In silico trial to test COVID-19 candidate vaccines: a case study with UISS platform.BMC bioinformatics · 2020Article
- Moving forward through the in silico modeling of tuberculosis: a further step with UISS-TB.BMC bioinformatics · 2020Article
- Generation of digital patients for the simulation of tuberculosis with UISS-TB.BMC bioinformatics · 2020Article
- Article
- Predicting the artificial immunity induced by RUTI® vaccine against tuberculosis using universal immune system simulator (UISS).BMC bioinformatics · 2019Article
- In silico/In vivo analysis of high-risk papillomavirus L1 and L2 conserved sequences for development of cross-subtype prophylactic vaccine.Scientific reports · 2019Article
- A bioinformatics potpourri.BMC genomics · 2018Article
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Authors and funding
4 authors.
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No grant is acknowledged in the PubMed record.
Abstract
backgroundHuman papillomavirus infection is a global social burden that, every year, leads to thousands new diagnosis of cancer. The introduction of a protocol of immunization, with Gardasil and Cervarix vaccines, has radically changed the way this infection easily spreads among people. Even though vaccination is only preventive and not therapeutic, it is a strong tool capable to avoid the consequences that this pathogen could cause. Gardasil vaccine is not free from side effects and the duration of immunity is not always well determined. This work aim to enhance the effects of the vaccination by using a new class of adjuvants and a different administration protocol. Due to their minimum side effects, their easy extraction, their low production costs and their proven immune stimulating activity, citrus-derived molecules are valid candidates to be administered as adjuvants in a vaccine formulation against Hpv.
resultsWith the aim to get a stronger immune response against Hpv infection we built an in silico model that delivers a way to predict the best adjuvants and the optimal means of administration to obtain such a goal. Simulations envisaged that the use of Neohesperidin elicited a strong immune response that was then validated in vivo.
conclusionsWe built up a computational infrastructure made by a virtual screening approach able to preselect promising citrus derived compounds, and by an agent based model that reproduces HPV dynamics subject to vaccine stimulation. This integrated methodology was able to predict the best protocol that confers a very good immune response against HPV infection. We finally tested the in silico results through in vivo experiments on mice, finding good agreement.
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