Evidence map›Paper›PMID 29295928›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Cargo navigation across 3D microtubule intersections.

Jared P Bergman, Matthew J Bovyn, Florence F Doval, Abhimanyu Sharma, Manasa V Gudheti, Steven P Gross, Jun F Allard, Michael D Vershinin

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 57 citations in OpenAlex.

  1. Motor-Assisted Co-Migration of Intracellular Organelles and Microtubules as a Mechanism for Directed Cargo Transport.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
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  19. Lipid droplet velocity is a microenvironmental sensor of aggressive tumors regulated by V-ATPase and PEDF.Laboratory investigation; a journal of technical methods and pathology · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jared P BergmanDepartment of Biology, University of Utah, Salt Lake City, UT 84112-0840.
Matthew J BovynDepartment of Physics and Astronomy, University of California, Irvine, CA 92697.ORCID 0000-0001-9331-4583
Florence F DovalDepartment of Physics and Astronomy, University of Utah, Salt Lake City, UT 84112-0830.
Abhimanyu SharmaDepartment of Physics and Astronomy, University of Utah, Salt Lake City, UT 84112-0830.
Manasa V GudhetiDepartment of Biology, University of Utah, Salt Lake City, UT 84112.
Steven P GrossDepartment of Physics and Astronomy, University of California, Irvine, CA 92697.
Jun F AllardDepartment of Physics and Astronomy, University of California, Irvine, CA 92697.
Michael D VershininDepartment of Biology, University of Utah, Salt Lake City, UT 84112-0840; vershinin@physics.utah.edu.ORCID 0000-0002-8207-1376
University of Utah · USUniversity of California, Irvine · USBruker (United States) · US

Funding

Mathematical, Computational and Systems BiologyT32EB009418 · NIBIB · UNIVERSITY OF CALIFORNIA-IRVINE · PI LANDER, ARTHUR D, NIE, QING · 2009 to 2019
$2.4M
Control of cargo distributions by microtubule motor physical interactions with cargo, cytoplasm and MAPsR01GM123068 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI ALLARD, JUN · 2017 to 2021
$1.7M
NIBIB NIH HHS T32 EB009418NIGMS NIH HHS R01 GM123068
6 · The paper itself

Abstract

The eukaryotic cell's microtubule cytoskeleton is a complex 3D filament network. Microtubules cross at a wide variety of separation distances and angles. Prior studies in vivo and in vitro suggest that cargo transport is affected by intersection geometry. However, geometric complexity is not yet widely appreciated as a regulatory factor in its own right, and mechanisms that underlie this mode of regulation are not well understood. We have used our recently reported 3D microtubule manipulation system to build filament crossings de novo in a purified in vitro environment and used them to assay kinesin-1-driven model cargo navigation. We found that 3D microtubule network geometry indeed significantly influences cargo routing, and in particular that it is possible to bias a cargo to pass or switch just by changing either filament spacing or angle. Furthermore, we captured our experimental results in a model which accounts for full 3D geometry, stochastic motion of the cargo and associated motors, as well as motor force production and force-dependent behavior. We used a combination of experimental and theoretical analysis to establish the detailed mechanisms underlying cargo navigation at microtubule crossings.

Indexed as

Biological TransportCytoskeletonHumansImaging, Three-DimensionalKinesinsKineticsMicrotubulesModels, BiologicalModels, TheoreticalProtein BindingKIF5A protein, humanKinesinsbiophysicscytoskeletal transportkinesinmicrotubulesnetwork

Identifiers

PMID29295928
PMCPMC5776960
OpenAlexW2782345288

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.