Evidence map›Paper›PMID 29295241›Full record

ArticleStudies in health technology and informatics2017

Characterizing Surgical Site Infection Signals in Clinical Notes.

Steven J Skube, Zhen Hu, Elliot G Arsoniadis, Gyorgy J Simon, Elizabeth C Wick, Clifford Y Ko, Genevieve B Melton

Abstract read
In one paragraph

Article in Studies in health technology and informatics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Characterizing Functional Health Status of Surgical Patients in Clinical Notes.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Steven J SkubeDepartment of Surgery, University of Minnesota, Minneapolis, MN, USA.
Zhen HuInstitute for Health Informatics, University of Minnesota, Minneapolis, MN, USA.
Elliot G ArsoniadisDepartment of Surgery, University of Minnesota, Minneapolis, MN, USA.
Gyorgy J SimonInstitute for Health Informatics, University of Minnesota, Minneapolis, MN, USA.
Elizabeth C WickDepartment of Surgery, University of California San Francisco, San Francisco, CA, USA.
Clifford Y KoDepartment of Surgery, University of California Los Angeles, Los Angeles, CA, USA.
Genevieve B MeltonDepartment of Surgery, University of Minnesota, Minneapolis, MN, USA.

Funding

University of Minnesota Clinical and Translational Science Institute (UMN CTSI)UL1TR000114 · NCATS · UNIVERSITY OF MINNESOTA · PI BLAZAR, BRUCE R · 2012 to 2015
$35.0M
Leveraging Advanced Informatics to Automate Data Collection of Healthcare Associated Infections (HAI) and Other Surgical Performance MeasuresR01HS024532 · AHRQ · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WICK, ELIZABETH C · 2016 to 2019
$1.9M
AHRQ HHS R01 HS024532NCATS NIH HHS UL1 TR000114
6 · The paper itself

Abstract

Surgical site infections (SSIs) are the most common and costly of hospital acquired infections. An important step in reducing SSIs is accurate SSI detection, which enables measurement quality improvement, but currently remains expensive through manual chart review. Building off of previous work for automated and semi-automated SSI detection using expert-derived "strong features" from clinical notes, we hypothesized that additional SSI phrases may be contained in clinical notes. We systematically characterized phrases and expressions associated with SSIs. While 83% of expert-derived original terms overlapped with new terms and modifiers, an additional 362 modifiers associated with both positive and negative SSI signals were identified and 62 new base observations and actions were identified. Clinical note queries with the most common base terms revealed another 49 modifiers. Clinical notes contain a wide variety of expressions describing infections occurring among surgical specialties which may provide value in improving the performance of SSI detection algorithms.

Indexed as

Quality ImprovementSurgical Wound InfectionAlgorithmsElectronic Health RecordsHumansRisk FactorsQuality and SafetySurgical Wound InfectionText-mining

Identifiers

PMID29295241
PMCPMC6197986

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.