Evidence map›Paper›PMID 29295222›Full record

ArticleStudies in health technology and informatics2017

Perceiving the Usefulness of the National Cancer Institute Metathesaurus for Enriching NCIt with Topological Patterns.

Zhe He, Yan Chen, James Geller

Abstract read
In one paragraph

Article in Studies in health technology and informatics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Trial
  2. Article
  3. A review of auditing techniques for the Unified Medical Language System.Journal of the American Medical Informatics Association : JAMIA · 2020
    Review
  4. Extended Analysis of Topological-Pattern-Based Ontology Enrichment.Proceedings. IEEE International Conference on Bioinformatics and Biomedicine · 2018
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Zhe HeSchool of Information, Florida State University, Tallahassee, FL, USA.
Yan ChenDepartment of Computer Information Systems, BMCC, City University of New York, New York, USA.
James GellerDepartment of Computer Science, New Jersey Institute of Technology, Newark, NJ, USA.

Funding

A family-based framework of quality assurance for biomedical ontologiesR01CA190779 · NCI · NEW JERSEY INSTITUTE OF TECHNOLOGY · PI PERL, YEHOSHUA · 2015 to 2017
$1.8M
NCI NIH HHS R01 CA190779
6 · The paper itself

Abstract

The National Cancer Institute Thesaurus (NCIt), developed and maintained by the National Cancer Institute, is an important reference terminology in the cancer domain. As a controlled terminology needs to continuously incorporate new concepts to enrich its conceptual content, automated and semi-automated methods for identifying potential new concepts are in high demand. We have previously developed a topological-pattern-based method for identifying new concepts in a controlled terminology to enrich another terminology, using the UMLS Metathesaurus. In this work, we utilize this method with the National Cancer Institute Metathesaurus to identify new concepts for NCIt. While previous work was only oriented towards identifying candidate import concepts for human review, we are now also adding an algorithmic method to evaluate candidate concepts and reject a well defined group of them.

Indexed as

National Cancer Institute (U.S.)NeoplasmsUnified Medical Language SystemVocabulary, ControlledAlgorithmsHumansUnited StatesBiomedical OntologiesQuality AssuranceVocabulary

Identifiers

PMID29295222
PMCPMC5785238

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.