Evidence map›Paper›PMID 29294038›Full record

ArticleJournal of experimental botany2018

Dark conditions enhance aluminum tolerance in several rice cultivars via multiple modulations of membrane sterols.

Tadao Wagatsuma, Eriko Maejima, Toshihiro Watanabe, Tomonobu Toyomasu, Masaharu Kuroda, Toshiya Muranaka, Kiyoshi Ohyama, Akifumi Ishikawa, Masami Usui, Shahadat Hossain Khan and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. TheFrontiers in microbiology · 2024
    Article
  3. Review
  4. Transcriptomic Analysis forInternational journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 2 countries.

Tadao WagatsumaFaculty of Agriculture, Yamagata University, Tsuruoka, Japan.
Eriko MaejimaGraduate School of Agriculture, Hokkaido University, Sapporo, Japan.
Toshihiro WatanabeGraduate School of Agriculture, Hokkaido University, Sapporo, Japan.
Tomonobu ToyomasuFaculty of Agriculture, Yamagata University, Tsuruoka, Japan.
Masaharu KurodaNARO Agricultural Research Center, Joetsu, Japan.
Toshiya MuranakaPlant Science Center, RIKEN, Yokohama, Japan.
Kiyoshi OhyamaTokyo Institute of Technology, Tokyo, Japan.
Akifumi IshikawaFaculty of Agriculture, Yamagata University, Tsuruoka, Japan.
Masami UsuiFaculty of Agriculture, Yamagata University, Tsuruoka, Japan.
Shahadat Hossain KhanHMD Science and Technology University, Dinajipur, Bangladesh.
Hayato MaruyamaGraduate School of Agriculture, Hokkaido University, Sapporo, Japan.
Keitaro TawarayaFaculty of Agriculture, Yamagata University, Tsuruoka, Japan.
Yuriko KobayashiFaculty of Applied Biological Sciences, Gifu University, Gifu, Japan.
Hiroyuki KoyamaFaculty of Applied Biological Sciences, Gifu University, Gifu, Japan.
Yamagata University · JPHokkaido University · JPGifu University · JPCentral Region Agricultural Research Center · JPHajee Mohammad Danesh Science and Technology University · BDRIKEN Center for Sustainable Resource Science · JPTokyo Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aluminum-sensitive rice (Oryza sativa L.) cultivars showed increased Al tolerance under dark conditions, because less Al accumulated in the root tips (1 cm) under dark than under light conditions. Under dark conditions, the root tip concentration of total sterols, which generally reduce plasma membrane permeabilization, was higher in the most Al-sensitive japonica cultivar, Koshihikari (Ko), than in the most Al-tolerant cultivar, Rikuu-132 (R132), but the phospholipid content did not differ between the two. The Al treatment increased the proportion of stigmasterol (which has no ability to reduce membrane permeabilization) out of total sterols similarly in both cultivars under light conditions, but it decreased more in Ko under dark conditions. The carotenoid content in the root tip of Al-treated Ko was significantly lower under dark than under light conditions, indicating that isopentenyl diphosphate transport from the cytosol to plastids was decreased under dark conditions. HMG2 and HMG3 (encoding the key sterol biosynthetic enzyme 3-hydroxy-3-methylglutaryl CoA reductase) transcript levels in the root tips were enhanced under dark conditions. We suggest that the following mechanisms contribute to the increase in Al tolerance under dark conditions: inhibition of stigmasterol formation to retain membrane integrity; greater partitioning of isopentenyl diphosphate for sterol biosynthesis; and enhanced expression of HMGs to increase sterol biosynthesis.

Indexed as

DarknessAluminumCell MembraneOryzaPhytosterolsPlant ProteinsAluminumPhytosterolsPlant ProteinsAl tolerancecarotenoiddark conditionsHMG genericesterolstigmasterol

Identifiers

PMID29294038
PMCPMC5853495
OpenAlexW2781388212

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.