Evidence map›Paper›PMID 29293625›Full record

ArticlePloS one2018

Targeted deletion of the zebrafish actin-bundling protein L-plastin (lcp1).

Margaret J Kell, Rachel E Riccio, Emily A Baumgartner, Zachary J Compton, Paul J Pecorin, Taylor A Mitchell, Jacek Topczewski, Elizabeth E LeClair

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Review
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  5. Ketone body mediated histone β-hydroxybutyrylation is reno-protective.bioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Article
  8. hapln1aNature communications · 2023
    Article
  9. Circulation · 2022
    Article
  10. Article
  11. LCP1 is a prognostic biomarker correlated with immune infiltrates in gastric cancer.Cancer biomarkers : section A of Disease markers · 2021
    Article
  12. Tools of the trade: studying actin in zebrafish.Histochemistry and cell biology · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Margaret J KellDepartment of Pediatrics, Northwestern University Feinberg School of Medicine / Stanley Manne Children's Research Center, Chicago, Illinois, United States of America.
Rachel E RiccioDepartment of Biological Sciences, DePaul University, Chicago, Illinois, United States of America.
Emily A BaumgartnerDepartment of Biological Sciences, DePaul University, Chicago, Illinois, United States of America.
Zachary J ComptonDepartment of Biological Sciences, DePaul University, Chicago, Illinois, United States of America.
Paul J PecorinDepartment of Biological Sciences, DePaul University, Chicago, Illinois, United States of America.
Taylor A MitchellDepartment of Biological Sciences, DePaul University, Chicago, Illinois, United States of America.
Jacek TopczewskiDepartment of Pediatrics, Northwestern University Feinberg School of Medicine / Stanley Manne Children's Research Center, Chicago, Illinois, United States of America.
Elizabeth E LeClairDepartment of Biological Sciences, DePaul University, Chicago, Illinois, United States of America.ORCID 0000-0002-4935-4577
DePaul University · USNorthwestern University · US

Funding

TRD - VisualizationP41GM103545 · NIGMS · UNIVERSITY OF UTAH · PI JURRUS, ELIZABETH · 2012 to 2019
$9.7M
Fluorender: An Imaging Tool for Visualization and Analysis of Confocal Data as ApR01GM098151 · NIGMS · UNIVERSITY OF UTAH · PI HANSEN, CHARLES · 2011 to 2014
$1.2M
Follow That Cell: Motility Analysis of L-Plastin Mutant ZebrafishR15GM120664 · NIGMS · DE PAUL UNIVERSITY · PI LECLAIR, ELIZABETH E · 2016 to 2020
$598k
NIGMS NIH HHS P41 GM103545NIGMS NIH HHS R01 GM098151NIGMS NIH HHS R15 GM120664
6 · The paper itself

Abstract

Regulation of the cytoskeleton is essential for cell migration in health and disease. Lymphocyte cytosolic protein 1 (lcp1, also called L-plastin) is a hematopoietic-specific actin-bundling protein that is highly conserved in zebrafish, mice and humans. In addition, L-plastin expression is documented as both a genetic marker and a cellular mechanism contributing to the invasiveness of tumors and transformed cell lines. Despite L-plastin's role in both immunity and cancer, in zebrafish there are no direct studies of its function, and no mutant, knockout or reporter lines available. Using CRISPR-Cas9 genome editing, we generated null alleles of zebrafish lcp1 and examined the phenotypes of these fish throughout the life cycle. Our editing strategy used gRNA to target the second exon of lcp1, producing F0 mosaic fish that were outcrossed to wild types to confirm germline transmission. F1 heterozygotes were then sequenced to identify three unique null alleles, here called 'Charlie', 'Foxtrot' and 'Lima'. In silico, each allele truncates the endogenous protein to less than 5% normal size and removes both essential actin-binding domains (ABD1 and ABD2). Although none of the null lines express detectable LCP1 protein, homozygous mutant zebrafish (-/-) can develop and reproduce normally, a finding consistent with that of the L-plastin null mouse (LPL -/-). However, such mice do have a profound immune defect when challenged by lung bacteria. Interestingly, we observed reduced long-term survival of zebrafish lcp1 -/- homozygotes (~30% below the expected numbers) in all three of our knockout lines, with greatest mortality corresponding to the period (4-6 weeks post-fertilization) when the innate immune system is functional, but the adaptive immune system is not yet mature. This suggests that null zebrafish may have reduced capacity to combat opportunistic infections, which are more easily transmissible in the aquatic environment. Overall, our novel mutant lines establish a sound genetic model and an enhanced platform for further studies of L-plastin gene function in hematopoiesis and cancer.

Indexed as

Gene DeletionAllelesAmino Acid SequenceAnimalsCloning, MolecularClustered Regularly Interspaced Short Palindromic RepeatsHumansMembrane GlycoproteinsMiceMicrofilament ProteinsSequence Homology, Amino AcidZebrafishZebrafish ProteinsMembrane GlycoproteinsMicrofilament ProteinsplastinZebrafish Proteins

Identifiers

PMID29293625
PMCPMC5749806
OpenAlexW2782523148

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.