Evidence map›Paper›PMID 29293505›Full record

ArticlePloS one2018

Diagnostic outcomes of exome sequencing in patients with syndromic or non-syndromic hearing loss.

Tina Likar, Mensuda Hasanhodžić, Nataša Teran, Aleš Maver, Borut Peterlin, Karin Writzl

Open access · goldAbstract readValidation Study
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 54 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Tina LikarClinical Institute of Medical Genetics, University Medical Centre Ljubljana, Ljubljana, Slovenia.
Mensuda HasanhodžićPoliclinic of Medical Genetics with Genetic Counseling for Out-Patient Care, Department of Paediatrics, University Clinical Centre Tuzla, Tuzla, Bosnia and Herzegovina.
Nataša TeranClinical Institute of Medical Genetics, University Medical Centre Ljubljana, Ljubljana, Slovenia.
Aleš MaverClinical Institute of Medical Genetics, University Medical Centre Ljubljana, Ljubljana, Slovenia.
Borut PeterlinClinical Institute of Medical Genetics, University Medical Centre Ljubljana, Ljubljana, Slovenia.
Karin WritzlClinical Institute of Medical Genetics, University Medical Centre Ljubljana, Ljubljana, Slovenia.ORCID 0000-0003-0388-5361
Ljubljana University Medical Centre · SIUniversity Clinical Center Tuzla · BA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hereditary hearing loss (HL) is a common sensory disorder, with an incidence of 1-2 per 1000 newborns, and has a genetic etiology in over 50% of cases. It occurs either as part of a syndrome or in isolation and is genetically very heterogeneous which poses a challenge for clinical and molecular diagnosis. We used exome sequencing to seek a genetic cause in a group of 56 subjects (49 probands) with HL: 32 with non-syndromic non-GJB2 HL and 17 with syndromic HL. Following clinical examination and clinical exome sequencing, an etiological diagnosis was established in 15 probands (15/49; 30%); eight (8/17;47%) from the syndromic group and seven (7/32; 21%) from the non-syndromic non-GJB2 subgroup. Fourteen different (half of them novel) non-GJB2 variants causing HL were found in 10 genes (CHD7, HDAC8, MITF, NEFL, OTOF, SF3B4, SLC26A4, TECTA, TMPRSS3, USH2A) among 13 probands, confirming the genetic heterogeneity of hereditary HL. Different genetic causes for HL were found in a single family while three probands with apparent syndromic HL were found to have HL as a separate clinical feature, distinct from the complex phenotype. Clinical exome sequencing proved to be an effective tool used to comprehensively address the genetic heterogeneity of HL, to detect clinically unrecognized HL syndromes, and to decipher complex phenotypes in which HL is a separate feature and not part of a syndrome.

Indexed as

Exome SequencingAdolescentAdultChildChild, PreschoolFemaleGenotypeHearing LossHumansMalePhenotypeSyndromeYoung Adult

Identifiers

PMID29293505
PMCPMC5749682
OpenAlexW2781841594

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.