Evidence map›Paper›PMID 29293344›Full record

ArticleThe journal of physical chemistry. B2018

Graph-Theoretic Analysis of Monomethyl Phosphate Clustering in Ionic Solutions.

Kyungreem Han, Richard M Venable, Anne-Marie Bryant, Christopher J Legacy, Rong Shen, Hui Li, Benoît Roux, Arne Gericke, Richard W Pastor

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
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  13. #COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol.The international journal of high performance computing applications · 2023
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  14. Structure of POPC Lipid Bilayers in OPLS3e Force Field.Journal of chemical information and modeling · 2022
    Article
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  16. Design principles of PI(4,5)PProceedings of the National Academy of Sciences of the United States of America · 2022
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  19. Bridges of Calcium Bicarbonate Tightly Couple Dipolar Lipid Membranes.Langmuir : the ACS journal of surfaces and colloids · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Kyungreem HanLaboratory of Computational Biology, National Heart, Lung, and Blood Institute, National Institutes of Health , Bethesda, Maryland 20892, United States.ORCID 0000-0002-2290-4858
Richard M VenableLaboratory of Computational Biology, National Heart, Lung, and Blood Institute, National Institutes of Health , Bethesda, Maryland 20892, United States.
Anne-Marie BryantDepartment of Chemistry and Biochemistry, Worcester Polytechnic Institute , Worcester, Massachusetts 01609, United States.
Christopher J LegacyDepartment of Chemistry and Biochemistry, Worcester Polytechnic Institute , Worcester, Massachusetts 01609, United States.
Rong ShenDepartment of Biochemistry and Molecular Biology, The University of Chicago , Chicago, Illinois 60637, United States.
Hui LiDepartment of Biochemistry and Molecular Biology, The University of Chicago , Chicago, Illinois 60637, United States.
Benoît RouxDepartment of Biochemistry and Molecular Biology, The University of Chicago , Chicago, Illinois 60637, United States.ORCID 0000-0002-5254-2712
Arne GerickeDepartment of Chemistry and Biochemistry, Worcester Polytechnic Institute , Worcester, Massachusetts 01609, United States.ORCID 0000-0002-3682-0241
Richard W PastorLaboratory of Computational Biology, National Heart, Lung, and Blood Institute, National Institutes of Health , Bethesda, Maryland 20892, United States.ORCID 0000-0002-2454-5131
National Institutes of Health · USUniversity of Chicago · USWorcester Polytechnic Institute · US

Funding

Computer Simulations of Membranes and BiopolymersZIAHL000340 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI PASTOR, RICHARD WALTER · 2009 to 2025
$29.1M
Polarizable Force Field for Proteins and LipidsR01GM072558 · NIGMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI ROUX, BENOIT · 2005 to 2023
$5.1M
Computer Simulations of Membranes and BiopolymersZ01HL000340 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI PASTOR, RICHARD WALTER · 2006 to 2008
$2.9M
Intramural NIH HHS Z01 HL000340NIGMS NIH HHS R01 GM072558
6 · The paper itself

Abstract

All-atom molecular dynamics simulations combined with graph-theoretic analysis reveal that clustering of monomethyl phosphate dianion (MMP

Indexed as

Computer GraphicsMolecular Dynamics SimulationCalciumCluster AnalysisIonsOrganophosphatesPotassiumSolutionsCalciumIonsmethylphosphateOrganophosphatesPotassiumSolutions

Identifiers

PMID29293344
PMCPMC6322214
OpenAlexW2781674676

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.