Evidence map›Paper›PMID 29291731›Full record

ArticleBMC cancer2018

Identification of fluorescence in situ hybridization assay markers for prediction of disease progression in prostate cancer patients on active surveillance.

Katerina Pestova, Adam J Koch, Charles P Quesenberry, Jun Shan, Ying Zhang, Amethyst D Leimpeter, Beth Blondin, Svetlana Sitailo, Lela Buckingham, Jing Du and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Katerina PestovaAbbott Molecular, Inc., 1300 East Touhy Avenue, Des Plaines, IL, 60018, USA. ekaterina.pestova@abbott.com.ORCID 0000-0001-8200-2621
Adam J KochAbbott Molecular, Inc., 1300 East Touhy Avenue, Des Plaines, IL, 60018, USA.
Charles P QuesenberryAbbott Molecular, Inc., 1300 East Touhy Avenue, Des Plaines, IL, 60018, USA.
Jun ShanKaiser Permanente Division of Research, Oakland, CA, USA.
Ying ZhangAbbott Molecular, Inc., 1300 East Touhy Avenue, Des Plaines, IL, 60018, USA.
Amethyst D LeimpeterKaiser Permanente Division of Research, Oakland, CA, USA.
Beth BlondinAbbott Molecular, Inc., 1300 East Touhy Avenue, Des Plaines, IL, 60018, USA.
Svetlana SitailoAbbott Molecular, Inc., 1300 East Touhy Avenue, Des Plaines, IL, 60018, USA.
Lela BuckinghamRush University Medical Center, Chicago, IL, USA.
Jing DuAbbott Molecular, Inc., 1300 East Touhy Avenue, Des Plaines, IL, 60018, USA.
Huixin FeiAbbott Molecular, Inc., 1300 East Touhy Avenue, Des Plaines, IL, 60018, USA.
Stephen K Van Den EedenKaiser Permanente Division of Research, Oakland, CA, USA.
Abbott (United States) · USKaiser Permanente · USRush University Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundProstate Cancer (PCa) is the second most prevalent cancer among U.S. males. In recent decades many men with low risk PCa have been over diagnosed and over treated. Given significant co-morbidities associated with definitive treatments, maximizing patient quality of life while recognizing early signs of aggressive disease is essential. There remains a need to better stratify newly diagnosed men according to the risk of disease progression, identifying, with high sensitivity and specificity, candidates for active surveillance versus intervention therapy. The objective of this study was to select fluorescence in situ hybridization (FISH) panels that differentiate non-progressive from progressive disease in patients with low and intermediate risk PCa.

methodsWe performed a retrospective case-control study to evaluate FISH biomarkers on specimens from PCa patients with clinically localised disease (T1c-T2c) enrolled in Watchful waiting (WW)/Active Surveillance (AS). The patients were classified into cases (progressed to clinical intervention within 10 years), and controls (did not progress in 10 years). Receiver Operating Characteristic (ROC) curve analysis was performed to identify the best 3-5 probe combinations. FISH parameters were then combined with the clinical parameters ─ National Comprehensive Cancer Network (NNCN) risk categories ─ in the logistic regression model.

resultsSeven combinations of FISH parameters with the highest sensitivity and specificity for discriminating cases from controls were selected based on the ROC curve analysis. In the logistic regression model, these combinations contributed significantly to the prediction of PCa outcome. The combination of NCCN risk categories and FISH was additive to the clinical parameters or FISH alone in the final model, with odds ratios of 5.1 to 7.0 for the likelihood of the FISH-positive patients in the intended population to develop disease progression, as compared to the FISH-negative group.

conclusionsCombinations of FISH parameters discriminating progressive from non-progressive PCa were selected based on ROC curve analysis. The combination of clinical parameters and FISH outperformed clinical parameters alone, and was complimentary to clinical parameters in the final model, demonstrating potential utility of multi-colour FISH panels as an auxiliary tool for PCa risk stratification. Further studies with larger cohorts are planned to confirm these findings.

Indexed as

Genetic MarkersAdenocarcinomaAgedCase-Control StudiesChromosomes, HumanDisease ProgressionFeasibility StudiesFollow-Up StudiesHumansIn Situ Hybridization, FluorescenceMaleMiddle AgedPrognosisProstatic NeoplasmsRetrospective StudiesRisk AssessmentGenetic MarkersBiopsyFISHFluorescence in situ hybridisationGenomic abnormalitiesPrognosisProstate cancerRisk stratification

Identifiers

PMID29291731
PMCPMC5749018
OpenAlexW2782081090

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.