Evidence map›Paper›PMID 29286457›Full record

ArticleJournal of visualized experiments : JoVE2017

Methods to Study Changes in Inherent Protein Aggregation with Age in Caenorhabditis elegans.

Nicole Groh, Ivan Gallotta, Marie C Lechler, Chaolie Huang, Raimund Jung, Della C David

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In one paragraph

Article in Journal of visualized experiments : JoVE, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nicole GrohProtein Aggregation and Aging, German Center for Neurodegenerative Diseases (DZNE); Graduate School of Cellular and Molecular Neuroscience, German Center for Neurodegenerative Diseases (DZNE).
Ivan GallottaProtein Aggregation and Aging, German Center for Neurodegenerative Diseases (DZNE).
Marie C LechlerProtein Aggregation and Aging, German Center for Neurodegenerative Diseases (DZNE); Graduate School of Cellular and Molecular Neuroscience, German Center for Neurodegenerative Diseases (DZNE).
Chaolie HuangProtein Aggregation and Aging, German Center for Neurodegenerative Diseases (DZNE).
Raimund JungProtein Aggregation and Aging, German Center for Neurodegenerative Diseases (DZNE).
Della C DavidProtein Aggregation and Aging, German Center for Neurodegenerative Diseases (DZNE); Della.David@dzne.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the last decades, the prevalence of neurodegenerative disorders, such as Alzheimer's disease (AD) and Parkinson's disease (PD), has grown. These age-associated disorders are characterized by the appearance of protein aggregates with fibrillary structure in the brains of these patients. Exactly why normally soluble proteins undergo an aggregation process remains poorly understood. The discovery that protein aggregation is not limited to disease processes and instead part of the normal aging process enables the study of the molecular and cellular mechanisms that regulate protein aggregation, without using ectopically expressed human disease-associated proteins. Here we describe methodologies to examine inherent protein aggregation in Caenorhabditis elegans through complementary approaches. First, we examine how to grow large numbers of age-synchronized C. elegans to obtain aged animals and we present the biochemical procedures to isolate highly-insoluble-large aggregates. In combination with a targeted genetic knockdown, it is possible to dissect the role of a gene of interest in promoting or preventing age-dependent protein aggregation by using either a comprehensive analysis with quantitative mass spectrometry or a candidate-based analysis with antibodies. These findings are then confirmed by in vivo analysis with transgenic animals expressing fluorescent-tagged aggregation-prone proteins. These methods should help clarify why certain proteins are prone to aggregate with age and ultimately how to keep these proteins fully functional.

Indexed as

Age FactorsAnimalsAnimals, Genetically ModifiedCaenorhabditis elegansCaenorhabditis elegans ProteinsModels, AnimalProtein AggregatesRecombinant ProteinsCaenorhabditis elegans ProteinsProtein AggregatesRecombinant Proteins

Identifiers

PMID29286457
PMCPMC5755480

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.