Evidence map›Paper›PMID 29285518›Full record

ArticleJournal of medical imaging (Bellingham, Wash.)2018

Accounting for reconstruction kernel-induced variability in CT radiomic features using noise power spectra.

Muhammad Shafiq-Ul-Hassan, Geoffrey G Zhang, Dylan C Hunt, Kujtim Latifi, Ghanim Ullah, Robert J Gillies, Eduardo G Moros

Abstract read
In one paragraph

Article in Journal of medical imaging (Bellingham, Wash.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
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  6. Review
  7. Article
  8. Article
  9. Article
  10. Uniqueness of radiomic features in non-small cell lung cancer.Journal of applied clinical medical physics · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Radiogenomics in brain, breast, and lung cancer: opportunities and challenges.Journal of medical imaging (Bellingham, Wash.) · 2021
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Muhammad Shafiq-Ul-HassanUniversity of South Florida, Department of Physics, Tampa, Florida, United States.
Geoffrey G ZhangUniversity of South Florida, Department of Physics, Tampa, Florida, United States.
Dylan C HuntH. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida, United States.
Kujtim LatifiUniversity of South Florida, Department of Physics, Tampa, Florida, United States.
Ghanim UllahUniversity of South Florida, Department of Physics, Tampa, Florida, United States.
Robert J GilliesH. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida, United States.
Eduardo G MorosUniversity of South Florida, Department of Physics, Tampa, Florida, United States.

Funding

(PQC4) Habitats in Prostate CancerR01CA190105 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI BALAGURUNATHAN, YOGANAND, GILLIES, ROBERT J. · 2014 to 2017
$2.8M
NCI NIH HHS R01 CA190105
6 · The paper itself

Abstract

Large variability in computed tomography (CT) radiomics feature values due to CT imaging parameters can have subsequent implications on the prognostic or predictive significance of these features. Here, we investigated the impact of pitch, dose, and reconstruction kernel on CT radiomic features. Moreover, we introduced correction factors to reduce feature variability introduced by reconstruction kernels. The credence cartridge radiomics and American College of Radiology (ACR) phantoms were scanned on five different scanners. ACR phantom was used for 3-D noise power spectrum (NPS) measurements to quantify correlated noise. The coefficient of variation (COV) was used as the variability assessment metric. The variability in texture features due to different kernels was reduced by applying the NPS peak frequency and region of interest (ROI) maximum intensity as correction factors. Most texture features were dose independent but were strongly kernel dependent, which is demonstrated by a significant shift in NPS peak frequency among kernels. Percentage improvement in robustness was calculated for each feature from original and corrected %COV values. Percentage improvements in robustness of 19 features were in the range of 30% to 78% after corrections. We show that NPS peak frequency and ROI maximum intensity can be used as correction factors to reduce variability in CT texture feature values due to reconstruction kernels.

Indexed as

computed tomographynoise power spectrumpeak frequencypitchradiation doseradiomicsreconstruction kernel

Identifiers

PMID29285518
PMCPMC5729963

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.